KEGG   Telopea speciosissima (New South Wales waratah): 122671615
Entry
122671615         CDS       T07910                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
tss  Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:tss00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tss03400]
    122671615
DNA repair and recombination proteins [BR:tss03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    122671615
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_2 DEAD ResIII Prok-RING_4 zf-RING_5 zf-C3HC4_4 RING_XB3-XBAT31 zf-RING_4 zf-ANAPC11 MEIOC zf-RING_11
Other DBs
NCBI-GeneID: 122671615
NCBI-ProteinID: XP_043724880
LinkDB
Position
8:57176926..57237810
AA seq 1043 aa
MGNKITDELITAVRSVICNDFTDMDIIRALHMGNNDVTAAINIIFDMPNFGNKERIDARR
SPEVSSRNSKPEMNVSVTPERIRNESRDCSLGSELSGARNCSMPECTLESAEPVRLQPSA
SNCTEWWFVGSAELAALSTCKGRKLKAGDEVIFSFPSKQSKSPSTAKFPGRGRVAAACSE
IVRFSTKDSVEIGRIPNEWARRLLPLVNDRKIRIEGCCKFAPDVLSIMDTILLSVSVYIN
SSVFRKHHHISVKLARNFNEESVVHPLPTLFRLLGLVPFKKAEFTPEELYTRKRPLESKD
SSVVHASLFHADKSKKPAVHGSIVENNQESISNSDLENIVGVGDTSELEERDPPNTLLCE
LRPYQKQALHWMIQLEKGGCLEEAAATMMHPCWDAYYLGNRRDLVVYLNAFSGEATTEFP
STLQMSRGGILADAMGLGKTIMTIALLLAYSDRGASSSNHPMSQVSTENSEVSSASDGSP
SDSKKVTKFSGFDKLMKSRTSLIGGGNLIVCPMTLLGQWKAEIESHAKPGSLSIYVHYGQ
SRPKDTKLLAENDVVLTTYGVLASEYSAENAESSGGLYSVRWFRVVLDEAHTIKSSKSQI
SIAVAALTADRRWCLTGTPIQNSLEDIYSLLRFLKVEPWGNWAWWYKLVQKPFEEGDERG
LKLVQSVLRPIMLRRTKFTTDREGRPILVLPPADVQVIYCELTAAEKDFYEALFKRSKVK
FDQFVEGGRILHNYASILELLLRLRQCCDHPFLVMSRGDTQEFSDLNKLAKRFLKGGEDT
PEVPKNVPSRAYIQEVVEELRKGEKGECPICLEAFEDAVLTPCAHRLCRECLLGSWRSPT
SGLCPVCRKTINRPELITAPTDSRFQINVEENWVESSKVSVLLQELENLRSSGSKSIVFS
QWTAFLDLLQIPLSRNNFPFVRLDGTLNQQQRDNVIKQFSEDSDILVLLMSLKAGGVGIN
LTAASSAFVMDPWWNPAVEEQAVMRIHRIGQTKRVMIRRFIVKGTVEERMETVQARKQRM
ISGALTDQEVRTARMEELKMLFT
NT seq 3132 nt   +upstreamnt  +downstreamnt
atggggaacaagattacagacgaattgataactgccgtacggtctgtaatttgtaatgat
ttcacggatatggatattatacgtgcccttcacatgggtaacaacgatgtcactgctgcc
attaacatcatcttcgatatgcccaatttcggcaacaaagaaagaattgatgctcggaga
agccccgaagtttcatcacgaaattcgaagccggaaatgaatgtgtcggtgacaccagag
agaattagaaatgagagtcgagattgctcattgggttctgaattgagtggggcacgtaat
tgtagtatgcccgagtgtacccttgaatctgcagaaccagtgagactgcagccgtctgcg
tcgaattgcactgaatggtggtttgttggcagcgctgaattagcggctttgtcgacctgc
aaaggaaggaagcttaaagctggtgatgaagtgatattctcattcccctccaagcagtcg
aagtccccctcgactgccaaattccctgggcgaggacgagtggcagcagcttgttcagaa
attgtgaggttctctacaaaagattcagtagagattgggcgcattccaaatgaatgggct
cggcgccttttgccactagtgaatgataggaagatccgtatagaagggtgttgtaaattt
gctccagatgtcctcagcattatggacacaatccttttgtcagtcagtgtgtatattaat
agttctgtgtttcgtaagcaccaccatatttcggtgaagttggcacgcaatttcaatgag
gaatcagttgtgcatcctcttcctactttgttcaggttgcttggactggtccctttcaag
aaggcagagttcacccctgaggaactttacacgaggaagagacccttagagtcaaaggac
agttctgtagttcatgcttcattatttcacgccgacaaatctaagaagcccgctgttcat
ggaagcattgttgaaaacaatcaggagtccatctcaaattctgatcttgaaaatattgtt
ggtgttggggacacctctgagctagaggaaagggaccccccaaatacattactgtgtgaa
ctaaggccttaccagaaacaggcactccattggatgatccaactggagaagggaggatgc
ttggaagaggcagcggcgactatgatgcacccatgttgggatgcatattaccttggaaac
aggagggatcttgttgtctatttgaatgcgttttctggagaagctacaactgaatttccg
agcaccctccaaatgtcaagaggaggaatccttgcagatgcaatggggcttgggaagacc
attatgacaatagctcttctgcttgcatattctgacagaggtgcatcatcaagtaatcat
cccatgagtcaggtttccactgaaaatagtgaagtcagcagtgcttcagatggatctcca
agtgattcaaagaaagttacaaagttttctggttttgataagctgatgaaatctaggacc
tcacttattggtggtggaaacctgattgtttgccccatgactctgctgggccagtggaag
gcagagattgaaagtcatgcaaaacctggatctttgtcaatttatgttcattatggtcaa
agtagacccaaggatacaaaacttttagcagagaatgatgttgttctcactacctatggt
gtgttagcttctgaatactctgctgagaatgctgaaagcagtggtggactttattcggtc
aggtggtttagagttgttcttgacgaagctcatactattaaatcttctaaaagccaaatt
tcgattgctgtggctgctctaactgctgatcgtcggtggtgtcttactggtacccctatt
cagaatagcttggaggacatttatagtctcctacgatttttgaaggtcgaaccttggggc
aactgggcctggtggtataaactcgttcaaaagccttttgaggagggtgatgagcgagga
ttgaagctggtccagtctgtattaaggccaatcatgttaagacgaacaaagtttaccacg
gatagagagggcaggccaattctggttctccctccagccgatgttcaggtaatttattgt
gaactcacagcagctgagaaggacttttatgaagctctttttaaaagatcaaaggtgaag
tttgaccagtttgttgagggaggacgaatcctccataattatgcttccattttggagtta
cttttgcgtcttcgccaatgctgtgaccatccatttctcgtgatgagtcgtggtgatact
caagaattctcagatctcaataagcttgcaaaacgtttccttaaaggtggtgaggatacc
ccagaagttccaaagaatgtgccctcaagggcttacattcaggaggttgtggaagagctg
cgcaaaggagaaaaaggagaatgtccaatctgtcttgaagcttttgaagatgcagttttg
acaccttgtgcccaccgtttatgtcgagaatgcctcttgggaagctggcgaagtcctact
tctggtctttgccctgtttgtaggaaaaccatcaacagaccagaacttattactgcccct
actgatagtcgattccagattaatgttgaggaaaattgggtggaatcatccaaagtttct
gttcttctgcaggagttggaaaatcttcgctcatctggatccaaaagcattgtttttagt
cagtggacagcatttctggaccttcttcaaatccctctatctcgaaataacttcccgttt
gttcgtttggatgggaccctaaatcaacagcaacgggataacgtaataaagcaattttcg
gaggacagtgacatcctggtgttgttgatgtcgttgaaggccggtggtgttggaataaat
ctaacagcagcttccagtgcttttgttatggatccatggtggaaccctgctgttgaggaa
caagctgtcatgcgtattcatcgcattggtcaaactaaaagggtaatgatcagacgattc
attgtgaagggaacagtcgaagaaagaatggagacagtgcaggccaggaagcaacggatg
atctctggtgctctaaccgatcaggaagttcgtactgcacgcatggaggaattgaaaatg
ctcttcacatag

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