Telopea speciosissima (New South Wales waratah): 122671623
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Entry
122671623 CDS
T07910
Name
(RefSeq) E3 ubiquitin-protein ligase ORTHRUS 2-like isoform X1
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122671623
03036 Chromosome and associated proteins [BR:
tss03036
]
122671623
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122671623
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122671623
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
122671623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAD_SRA
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
PHD
zf-RING_5
Prok-RING_1
zf-RING_6
RING_XB3-XBAT31
TRAF3_RING
zf-RING_10
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
122671623
NCBI-ProteinID:
XP_043724891
LinkDB
All DBs
Position
8:1827964..1859651
Genome browser
AA seq
787 aa
AA seq
DB search
MAEAQRRQQLPCDAGGICMLCEKKPADDDKLICITCATPWHLSCLSVRPETLASAVQWEC
PDCVPTAGDFPAPIVGVSLVSGDSATSGELIAAIRAIEADESLTEQEKAKKRQELMSKSS
PHIDESKSKKSKSSGENDVLGLLDESLNCSFCMQLLERPVTTPCGHNFCLKCFQKWVGQG
KRTCAKCRHTIPNKIASQPRINSVLVVAIRMAKLSNLTDQRGPLKSYHFIHNQNRPDKAF
TTERAKKSGKANACSGKIFVTVPPDHFGPILAENDPVRKQGVLVGESWEDRMECRQWGTH
LPHVAGIAGQKEYGAQSVALSGGYEDDEDNGEWFLYTGSGGRDLSGNKRTNKEQSFDQEF
SSMNEALRVSCNKGYPVRVVRSHKETRSSYAPETGVRYDGIYRIEKCWRKVGIQGKKVCR
YLFVRCDNEPAPWTSDEHGDRPRSLPAVPELMNATDITERKEIPHWDYDEEDGSWKWKKP
PPPSRKERVATGSQGERKRIGAKRMTEQERLLKEFSCLICRNVMTLPLTTPCGHNFCKPC
LENAFAGQTFVRERTCQGRRSLRAQKNVMKCPSCSNDISDFLQNPQVNRDVMDVIEKLKT
KSEGEVSKSDGELGDNTEEPIVAEKSNAEFIDKETNVIDKLLAEGLCDDKSNGVEESPDA
GEDTQQKLMRTCKRKTSDGGDCSKVLGKMEKDKICAEFSDAVAVDAKIYPDQLGTSADAT
EHLQTPGDGRNPKRSYKRRKADNAGDSIMKQNVGLRTRGRKAREVTDEGNDSPSSPLHVR
SDDDDFQ
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcgcagcgtcgacaacagctcccttgcgacgcaggtggcatttgcatgttg
tgcgaaaaaaagcccgcagatgacgataagctcatctgcatcacttgcgctactccttgg
catctcagttgtctatccgttcgtcctgaaaccctagcctctgctgttcaatgggaatgt
ccagactgtgttccgaccgccggcgattttccggcaccgatcgttggagtttctttagta
tccggcgattctgcaacttccggtgaactgatcgctgcgattcgagctatcgaagccgat
gaatctctgacggagcaggagaaggccaagaaacggcaggagcttatgtctaaaagctcg
ccgcatatcgatgagtccaagtccaagaagagtaaaagtagcggagagaatgatgtcctc
ggcctccttgatgaaagcttgaactgctccttttgtatgcagttgctggaaagacctgtt
acgacaccttgtggccacaatttctgcttgaagtgctttcaaaaatgggtggggcagggg
aagcgtacctgtgcaaagtgccggcacaccattcccaacaagattgcgagtcagcctcgt
atcaactcggtacttgttgttgctatccgtatggccaagttgtcaaatttgaccgatcag
cgaggaccattgaaatcctaccattttatacacaaccaaaacagacctgacaaagcattt
acaacagagcgggcaaagaagtcgggaaaagctaatgcttgtagtgggaagatctttgtt
acggtcccgccggatcatttcggaccaatccttgcggagaatgacccagtgagaaagcag
ggtgtgttggttggggagtcttgggaggaccgcatggaatgcaggcaatgggggacccat
cttccacatgttgcggggattgctgggcaaaaggaatatggtgcccagtcagtggcactg
tctggaggctatgaggatgatgaggacaatggcgagtggtttctttacacagggagtggt
ggaagagacctgagtgggaataagcgcacaaataaggagcaatcctttgatcaggagttc
tcatctatgaatgaggctcttcgagtaagctgcaacaaaggttatcctgtaagagttgta
aggtctcacaaggagacacgttcttcttatgctccagaaactggggtgcggtatgatggt
atttataggattgagaaatgttggcgtaaagttggaattcagggtaagaaggtctgccga
tatctgtttgttagatgtgacaatgaacctgcaccgtggacaagtgatgagcatggagac
cgaccaagatcacttcctgctgttccagagcttatgaatgcaacagacatcacagaaagg
aaagaaatcccgcattgggattatgatgaggaggatggtagttggaaatggaagaaacca
ccaccacccagcagaaaagaacgagtggcaacgggaagtcagggtgagcgaaagaggatt
ggagcaaagagaatgactgaacaggagaggctcctgaaagaatttagctgcctgatatgt
cggaatgtgatgactcttcctcttacaactccttgtggtcataatttttgcaagccttgt
ttggaaaatgcctttgctggtcagacttttgtgagggagaggacatgtcagggtaggcgg
tcacttagggcacagaagaacgtcatgaaatgcccatcttgctctaatgacatttctgac
tttcttcaaaacccacaggtcaatagagatgtgatggatgtaatagaaaagctcaagacc
aagagcgagggggaggtctctaaaagtgatggggaattgggtgataacactgaagaacct
attgttgctgagaagtctaatgctgagttcatagataaagaaactaatgtgattgacaag
cttcttgctgagggcttgtgtgatgacaaatctaatggtgttgaggagtcacctgatgct
ggagaagatacacagcaaaaactgatgcgcacttgcaagcgaaagacatctgatggtggg
gattgctcaaaggttcttggcaagatggagaaggacaaaatatgtgcagagttctctgat
gctgtggctgtagatgctaaaatttaccctgaccagcttggaacatcagcagatgccaca
gaacatttgcagactccaggggatgggagaaatcctaagaggagttataagcgaaggaag
gctgataatgctggggatagcatcatgaagcagaatgttgggttgaggaccagaggaaga
aaagctagagaggtgacagatgaaggaaatgactcaccatcaagtcctcttcatgttcga
tctgatgatgatgattttcaataa
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