KEGG   Telopea speciosissima (New South Wales waratah): 122671899
Entry
122671899         CDS       T07910                                 
Name
(RefSeq) protein transport protein SEC13 homolog A-like
  KO
K14004  protein transport protein SEC13
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03013  Nucleocytoplasmic transport
tss04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122671899
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122671899
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tss03019]
    122671899
   04131 Membrane trafficking [BR:tss04131]
    122671899
Messenger RNA biogenesis [BR:tss03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     122671899
Membrane trafficking [BR:tss04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    122671899
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    122671899
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    122671899
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_Vps41 WDR55 Beta-prop_WDR35_TULP_N Beta-prop_RIG_2nd Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 WD40_Gbeta EIF3I Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_WDR41 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 122671899
NCBI-ProteinID: XP_043725312
LinkDB
Position
8:complement(9594895..9596101)
AA seq 302 aa
MPPQKIETGHQDTIHDVAMDYYGKRLASASSDTTIKITGVSSNSTSQHLATLSGHQGPVW
QVAWVHPKFGSILASCSYDGRVILWKEGNQNEWTQAQVFDIHKSSVNSIAWAPHELGLWL
ACGSSDGNISVHTARADGGWDTTKIDQAHPVGVTSVSWAPSMAPGALVGSDMFEPVQKLV
SGGCDNTVKVWKLYHGNWKMDCFPALHMHSDWVRDVAWAPNLGLPKSTIASASQDGTVII
WTVAKEGDQWEGKVLNDFKTPAWRVSWSLTGNILAVADGNNNVTLWKEAVDGEWQQVTTV
EP
NT seq 909 nt   +upstreamnt  +downstreamnt
atgcctccccagaagattgaaacgggccaccaagacaccattcacgatgtggccatggat
tactatggcaagcgtttggcatctgcatcttcggataccactatcaagataactggtgtg
agcagcaattctacttcgcagcacttggcaacattgagtggtcaccaaggtcctgtttgg
caggttgcatgggtgcacccaaaatttggctccatccttgcttcctgctcttatgatggt
agagtgatactttggaaagagggtaaccagaacgagtggactcaggcccaagtttttgat
atccacaagtcctccgtcaattccattgcttgggctccacatgaacttggcctttggttg
gcctgtggatcatccgatggaaacatatcagtccatactgccagggctgatggtggttgg
gacactacaaagattgatcaagctcaccctgtaggtgtcacctctgtttcatgggcccct
tcaatggctcctggtgctcttgttggatctgacatgtttgagcctgtccagaagcttgtt
tcaggtggatgtgataacactgtgaaggtatggaagctgtaccatggaaattggaagatg
gattgcttccctgctcttcatatgcactctgattgggttagggatgtggcttgggcgcct
aacttggggcttccaaagtctacaattgcgagcgcttcacaggatggaacagttattata
tggaccgtagctaaggaaggtgaccaatgggaaggcaaagttttgaacgattttaagacc
ccagcttggagggtctcatggtcgctgactggaaatatattggctgtggcagatggaaac
aacaatgtaacattgtggaaagaagcagtagatggggagtggcaacaggtgactactgtt
gagccatag

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