Telopea speciosissima (New South Wales waratah): 122671920
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Entry
122671920 CDS
T07910
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00040
Pentose and glucuronate interconversions
tss01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122671920
Enzymes [BR:
tss01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122671920
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
122671920
NCBI-ProteinID:
XP_043725343
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Position
8:complement(61955399..61958265)
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AA seq
335 aa
AA seq
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MLLCILFICLLTFLSSLTTATLNFTLPHEHPNPESVVQELQWRFKESLSRRQLMGFHEKD
QTVACPTGNPIDDCWRCNPNWASNRQNLADCGIGFGRNAGGGKGGMTYIVTDSSDAGLKP
GTLRYGVSLNQPLWIIFSGDMTIKLKEKLMMSSFKTIDGRGAIVHIVGAGCLILDQVSNV
IIHNVHIHDCVPAKSDGDGITIMSSSKIWVDHCTLSSCTDGLIDVTLGSTGITISNNYFS
HHDKVMLLGHNDNFVADSGMQVTVALNHFGEGLGQRMPRCRHGYFHIVNNDYTHWGIYAV
GGSANPTINSQGNRYTAPGEPECERGNKEIGHTRE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgctgctatgcattctcttcatttgtctcttaacctttctttcttctcttactactgca
actctcaactttactcttcctcatgaacacccaaaccctgaatcagttgttcaagaatta
caatggaggtttaaggagtccttatcaagaagacagcttatgggtttccatgagaaagat
cagacggttgcgtgcccgaccggaaacccaatcgacgattgctggcggtgcaaccccaat
tgggcatcaaataggcagaatttagctgattgtggtattggttttggccggaatgcgggc
ggcggaaagggtggtatgacttatattgttactgactcctccgacgccggattgaagccg
gggacattacgttatggggtgtccttaaatcaacccttatggatcattttttccggcgac
atgactataaagcttaaagagaagcttatgatgagtagcttcaagacgatagatggtcgt
ggtgctattgttcatattgttggtgctgggtgtctcattttagatcaagttagtaatgtg
atcatccataatgttcatattcatgattgtgttccggcgaaatcggacggtgatggtatc
acaatcatgagttcaagcaagatttgggtcgatcattgtaccctctctagttgcactgat
ggtctcatcgatgttacacttggctccaccggcatcactatttcaaacaactatttctcc
caccatgacaaggtgatgcttttagggcacaacgacaattttgtcgccgattccggcatg
caagtgacggtggcattgaaccattttggtgaggggttagggcaaaggatgccaagatgc
aggcatggttacttccacattgtcaataacgattacacacattgggggatatatgccgtc
ggcggaagtgcaaacccaacgataaacagtcaggggaatcgatatacggcgccaggagaa
cccgaatgcgaaagaggcaacaaggagattggacacacaagagagtga
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