Telopea speciosissima (New South Wales waratah): 122672532
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Entry
122672532 CDS
T07910
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00040
Pentose and glucuronate interconversions
tss01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122672532
Enzymes [BR:
tss01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122672532
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
122672532
NCBI-ProteinID:
XP_043725930
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Position
8:60578221..60579921
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AA seq
496 aa
AA seq
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MERYYVFIVIVIFNLYMVASVVARGGGGGGCGLINVDELKNNVVKNLYGIEVGLKLLTKE
EQVLVEKSKKFNLVTSILRNFLGNNFKQAEKDFSRLIHHRSSVTNFTGSTNNLEAVVSFS
KQAIIQAKKSHILIHRIIQCMNNSIATPKQAFEPSRHNETDCVVDGTKCQYSQYVRGKKL
QICAYGFARCVTGGAFGPYYTVYNSDDDPKNPAPGTLRFAVNFAGGHEGGAWIIFKKSMV
IRLKDKLWIKSNTTIDGRGVVVSIIGQVLALQHVENVILHNFIVSFTGDSDTIHVYEGSH
NVWIDHLTSSEAQLGLIRVLQGSTDVTISNCFLSNYDFNLLLGASDKDTIDHTLRVTVHR
NWFESSTQRMPHCRWGYCHVSNNYYKNWNYYATGARVSARVYSELNVFNPGSKKEVTPWF
QNFNSDLSPTIVSSKDLLLKGATFHQFLHHQTFSSPRDLFPNYVVPTRPTDPLEDLVMNY
SGALFGSKLKDCLATP
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggagaggtattatgtcttcattgttattgttatatttaatctctatatggttgcttct
gtagtagccagaggaggaggaggaggaggttgtggtttgattaatgtagatgaattgaag
aacaatgtagtaaaaaatctatatggcatcgaagtgggtttgaagttattgacgaaagaa
gaacaagtattagtagaaaagagcaagaaatttaatctcgttactagcattttgcggaac
tttctggggaacaattttaaacaagctgagaaggattttagccggctgattcatcatcgt
tcatcagtcacaaacttcactggctctactaataacttggaagcggttgttagtttttcc
aagcaagcaataatccaagctaaaaaatctcatatcttgattcatcgaatcatccaatgc
atgaacaactcaattgcaactccaaagcaagcatttgaaccatcaagacacaatgaaaca
gattgtgttgtggatggtactaaatgtcaatactcacaatatgtgcgaggcaaaaaactc
caaatctgtgcatatggcttcgcgagatgtgttaccggcggtgcattcggcccttattac
actgtctacaactcagatgatgacccaaaaaatccagcgcctggtactctccgttttgct
gtaaattttgcaggtggacatgaaggtggagcttggattatattcaagaaaagcatggtt
attagacttaaagacaagttatggattaagtcaaatacaaccattgatggaagaggagta
gttgtttccattataggacaagtactagcccttcaacatgtagagaatgtgattttgcat
aactttattgtaagctttactggggatagtgataccattcatgtgtatgaaggatctcat
aatgtttggattgatcatttaacttcaagcgaagcacaattaggattgattagagtcttg
caaggctcaactgatgttacaatctctaattgttttctttcaaattacgatttcaatcta
cttttaggggcatctgacaaagatactattgatcacacattaagggttacagtgcatcgg
aattggttcgagtcctctacgcaaagaatgccacattgcaggtggggttattgccatgta
tcaaacaactattacaaaaactggaattattatgcaactggagcaagggtttctgccagg
gtttactcagagctaaatgtgttcaatccagggtcgaagaaagaggtgactccatggttc
cagaacttcaattccgatctctcaccaaccatcgtctcatccaaagaccttttgctaaag
ggagctacgtttcatcaattcttgcatcatcagacatttagcagtcctcgggatctattt
cctaactacgtggttccaactcgacctacggatccgctagaagacctggtgatgaactat
tcgggggctttatttggatctaaacttaaagattgcttggcaactccatga
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