Telopea speciosissima (New South Wales waratah): 122672595
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Entry
122672595 CDS
T07910
Name
(RefSeq) protein argonaute PNH1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122672595
03036 Chromosome and associated proteins [BR:
tss03036
]
122672595
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122672595
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122672595
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
122672595
microRNA pathway
RISC loading complex
122672595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Piwi_N
Motif
Other DBs
NCBI-GeneID:
122672595
NCBI-ProteinID:
XP_043725989
LinkDB
All DBs
Position
8:complement(26203279..26210908)
Genome browser
AA seq
938 aa
AA seq
DB search
MPHVQMKDPQERHLVSRKPLQNSMNQQKPASQSLENCIVCFQNPQKSFGRRRVRGRGKGV
QVQGVKQAELDLDMGSQVLAKGEMFQRRPGFGQLGTKCIVKANHFLAELPDKDLNQYDVT
ITPEVVSRRMNRAIMSQLVKLHRETELGMRLPAYDGRKNLYTAGSLPFTSKEFKIKVVSE
DEGLGITRDQEFKVAIKFAARADMHQLRQFLAGKQVDAPQETLQILDIVLRELSSQRYIS
IGRSFYSPDIRKPQQLGGGLESWCGFYQSIRPTQMGLSLNIDMSTTAFIEPLPVIDFVGQ
VLGKDVLSRPLSDSDRIKVKKALRGVKVEITHRGNVRRKYRISGLTSQPTRELIFPVDEQ
KNMKSVVEYFQEMYGFTIQHSHLPCLQVGNQKKANYLPMEACKIVEGQRCTKSLNEKQIT
SLLKVTCQRPREKEMDILQTFHQNEYDQDPYAKEFGISITDKLTSVEARVLPAPWLKYHD
TGKEKDCLPQVGQWNMMNKKMINGSTVNYWACINFSRSVQESTVRTFCQELAQMCQVSGM
EFNHESVIPIHSARPDQVEKALKYVYSTSLNKLKGKELELLIAILPDNNGSLYGDLKRIC
ETDLGLISQCCLTKHVFKISKQYLANVSLKINVKMGGRNTVLLDALSWRIPLVSDIPTII
FGADVTHPETGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWHDPHRG
TVSGGMIRELLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQ
PRVTFVVVQKRHHTRLFANNHKDKSSIDKSGNILPGTVVDTKICHPTEFDFYLCSHAGIQ
GTSRPAHYHVLWDENNFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYM
EPGVPENPATRSKNSSNGSRVRPLPALKERVKKVMFYC
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacgtacagatgaaggacccccaagagagacatttggtttcaaggaaacctctt
cagaactccatgaatcagcagaagccggcttcccagtcgttagagaactgtattgtttgc
tttcaaaatccacagaagagttttggtaggagaagagttagaggaagaggaaaaggtgtg
caagttcagggggtaaagcaagctgagcttgatcttgatatgggatcccaagttttggcc
aaaggtgagatgttccaacgccgacctggctttggtcaattgggtactaaatgcattgtt
aaagcaaaccatttccttgcggagttgccagacaaggacctaaatcagtacgatgtgaca
ataactcctgaggtggtttcccgtcgcatgaacagagcaattatgtctcagttagtgaag
cttcacagagagactgaattgggtatgaggctgcctgcttatgatgggaggaagaatctt
tatacagctgggtcgctcccttttacctcaaaagagttcaaaataaaagtagttagtgaa
gatgagggtctgggcattaccagggatcaagaatttaaagtggcaatcaaatttgcagct
cgagcagatatgcaccagttacgccaatttcttgctggaaagcaagttgatgctcctcaa
gaaactctacagattcttgacattgtcttgagggaattgtctagccaaaggtacatatca
atagggagatcattttattcccctgatattagaaaaccacagcagctgggtggtgggtta
gaatcttggtgtggtttctaccagagtataagaccaacgcagatgggattgtcccttaat
attgacatgtccacaactgcgttcattgaaccactcccagtgatagattttgtaggtcaa
gttttgggcaaagatgttttgtcaagaccattatctgattctgatcgcattaaggttaag
aaagccctcagaggagtcaaagttgagattactcaccgaggaaatgtacgacgaaaatac
cggatttcaggattaacatcacagcctacaagagaactaattttcccagtggatgaacaa
aagaacatgaaatcagtcgtcgaatactttcaggagatgtatggatttaccattcagcat
tcccatcttccttgccttcaagtaggaaaccagaaaaaagcaaattatttgccaatggag
gcttgcaaaattgttgagggacaaagatgcacaaagagcttgaatgaaaagcagataacg
tccttgctaaaagttacctgccagagaccacgggagaaagaaatggacattttgcagaca
tttcatcaaaatgagtatgatcaagatccttacgcaaaggaatttggtatatctatcact
gacaagcttacatctgttgaagctcgggtcctccctgcaccatggctgaaatatcatgat
actgggaaagaaaaagattgtttgcctcaggttggtcagtggaatatgatgaataagaaa
atgataaatgggagtaccgtaaattactgggcttgtatcaacttctcaagaagcgttcaa
gaaagcactgttcgtactttttgtcaggaacttgctcagatgtgtcaagtctctggcatg
gaattcaatcatgaatctgttattccaatacactcagcaaggccagatcaagtggagaaa
gcactcaaatatgtatatagcacatcactgaacaaactcaaggggaaagagttggagcta
cttattgctattctcccagacaacaatggttctctgtatggtgatttaaagagaatttgt
gaaacggatttggggttgatatcccagtgctgtctaacaaaacatgttttcaagattagc
aaacagtacctggcaaatgtgtcacttaaaattaatgtcaagatggggggaagaaatacg
gtacttttagatgctttgagttggagaattcctttggttagtgacattcccacaataata
tttggagctgatgtaactcatccggagactggggaggactctagtccatctattgctgct
gttgtagcttcccaagattggcctgaagttacaaaatatgctgggttggtgtgtgctcag
gctcacaggcaagagcttattcaggacttgttcaaaacctggcatgatcctcatcggggt
acagttagtgggggcatgatcagggagcttttaatttcctttaggaaggcaactggacag
aagccattgagaataatattttacagagatggtgtcagtgaagggcaattttatcaggtt
ctgctgtatgaattagatgctatcagaaaggcttgtgcatccttggagccaaattaccag
cctcgggtaacctttgtggtggtccaaaaacgtcatcatacgagattgtttgccaacaac
cacaaggataaaagtagcattgataagagtggaaacatcctacctggcactgtggtggac
accaagatctgtcatcctactgaattcgacttctacctctgcagtcatgctggaatccag
ggaacaagtcgaccagctcattatcatgtcctctgggatgaaaacaatttcactgcagat
gaaattcaatcacttaccaacaatctatgttatacgtatgctcgatgcacgcgatctgtt
tcagtggttcctcctgcttactatgctcatctggctgcatttcgagctcgattttacatg
gaaccaggggtgcctgagaaccctgcaacacgaagcaagaactcatcaaatggttctcgt
gtccgacctctacctgcactgaaagaaagggtgaaaaaggtaatgttctactgttag
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