Telopea speciosissima (New South Wales waratah): 122672745
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Entry
122672745 CDS
T07910
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122672745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tss03036
]
122672745
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
122672745
INO80 complex (yeast)
122672745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
DEAD
HDA2-3
RCS1
DMRT-like
PSY3
Motif
Other DBs
NCBI-GeneID:
122672745
NCBI-ProteinID:
XP_043726157
LinkDB
All DBs
Position
8:59205261..59221952
Genome browser
AA seq
1569 aa
AA seq
DB search
MENKRHSKNGYSYSNLFNLESLMNFQLPQQDDDFDNYGNSSQDESRGSQGKEVMVDSGNG
VLLRRSSELGRKKKRRYFDAEAGSNSSARRDAESNDEDEDSGYRNHITEEHYRSMLGEHI
QKYRRVRFKETSSNPAATRIKMPLPKRNLISKGRKSGNEDRVLHGVETPSEYLREISPIK
HGSHYDTDFTSEYGNDRFTSSFDSGYLDIGEGITYRIPPTYDKLATSLNLPSFLDIRVDE
YYLKGTLDLGSLAAMMASDRTFGLQNRGGMGEPQPQYESLQARLKALSANNSVQKFDLQV
SDTGLNSSIPEGAAGGIQRSILSDGGTLQVYYVKVLEKGDTYEIIERRLPKKQIVKKDPA
SIEKEEMEKVGKVWVNIVRRDIPKHHRFFTNFHRKQLTDAKRFSEICQREVKLKVSRSLK
LMRGAAIRTRKLARDMLVFWKRVDKEQAEIRKREEKEAAEAMKREEELREAKRQQQRLNF
LLSQTELYSHFMQNKATPQSSEALPVSDGEPNNQDFSLSTSDVKPGEEDPEEAELRLEAL
RAAQLAVSQQKKITSAFDSECQKLREAAETEGQTKDSSIAGSSNIDLLHPSTMPVTSSVQ
TPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGP
FLVVAPASVLNNWADEISRFCPDLRTLPYWGGLQERQILRKNINPKRLYRRDSGFHILIT
SYQLLVSDEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPVQNNMA
ELWALLHFIMPTLFDSHEQFNEWFSKGIENHAEHGGTLNEHQLNRLHAVLKPFMLRRVKK
DVITEMTGKKEVTVHCKLSSRQQAFYQAIKNKISLAELFDGRRGHLNEKKILNLMNIVIQ
LRKVCNHPELFERNEGSSYLYFGEIPNSLLPPPFGELEDIHYAGGRNPITYMVPKLFHQE
IVQSAEMPSSVFNHGVQRESFEKLFNIFSPINIYKSVLPYARSSDGSSPVNSGTFGFTHL
MDLSPGEVAFLAKGSFMEKLLFSILRWDQQFLDELLDVFMESEGDDLQDRQLDSGKVRAV
TRMLLMPTRSESNLLRRKLATGPGDAPYEALVVSHQDRLVSNTRLLQSTYAFIPRARAPP
INAHCSNRNFAYEMLEELHNPWVKRLFFGFARTSQCNGPREPSGPHNLIQEIDSEIPVSR
PILQLTYKIFGSSPPMQPFDPAKMLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNI
LEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRGDIFVFLLSTRAGGLGINLTAADTVI
FYESDWNPTLDLQAMDRAHRLGQTKEVTVYRLICKETVEEKILQRASQKNTVQQLVMTGG
HVQGDLLAPEDVVSLLLDDAQLEQKLREAPLQVKERQKKKRATKGIRLDAEGDASWEDFA
NIQDSGYEVTPDPESGNASNKRKASSDKQTPPKARSQKAPKTSDSFMGLDEPHSIDYELD
NSVQNRDLQQHKPKRPKRPKKSINENIEPAYTAPGTVTPEPTEYPHAYNSVDAGIRALEE
ISPSNHSPT
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaagcgtcactcaaagaacggatattcatactccaatctcttcaatcttgag
tctttgatgaactttcaacttcctcaacaagatgatgattttgataattatggcaatagt
agtcaggatgagagcagaggtagccaaggtaaagaagtaatggtggacagtgggaatgga
gttctgttacggaggtcatcagaattaggccgcaagaagaagcggcggtacttcgacgct
gaggctggttcaaattcttctgccaggagagacgccgaaagtaacgacgaggacgaagac
agcgggtataggaaccacattacggaggagcactaccgatcaatgctgggggaacacatt
cagaagtaccgaagggtgaggttcaaagagacttcatcaaatccggcggccaccagaata
aaaatgccacttccaaaacgtaatctcatctccaaaggccggaagtcagggaatgaggat
agagtgttacatggtgtggaaacaccatcagagtatcttagggaaattagtcctattaag
catgggagccactatgatacagatttcacatcagaatatgggaatgataggttcacttcc
tcatttgattctggttatttggatattggggagggcatcacttataggattcctccaact
tatgataagcttgctacatctctgaatttgccgagcttcttggatatccgggtggacgaa
tattatttaaagggtacactggatttgggatccctagctgcgatgatggcttctgataga
acatttggtcttcaaaaccgaggtggaatgggtgagcctcagccgcagtatgaatccctt
caagcaagattaaaggccttatcagccaataattcagttcaaaagtttgacctacaagtc
agtgacactggtttgaattcctccatccctgagggggcagctggaggtatacaaaggtct
attttgtctgacggaggtaccttgcaagtttactatgtgaaggtcttggagaaaggagac
acgtatgagattattgaacgtaggctacccaagaagcaaatagtgaagaaagatcctgct
tcgattgagaaagaggagatggaaaaggttgggaaagtctgggtgaacattgtgagaaga
gatataccaaagcatcacagatttttcactaatttccataggaaacaattaactgatgct
aagaggttctcagaaatttgtcaaagagaggtaaaattgaaggtgagcaggtctcttaaa
ttgatgaggggagcagcgatccgcactaggaaattggctagagatatgctggtattttgg
aaaagggtagataaggagcaggctgagattaggaagagagaagaaaaagaagctgcagaa
gctatgaagcgtgaggaggagctccgtgaagcgaaaagacaacaacagagactgaatttc
ctattatcacaaacagagctctacagtcatttcatgcagaacaaagcaactccacaatca
tcagaagcattacctgtgagtgatggagaaccaaataaccaagatttctctctgagtacc
tcagatgttaagcctggggaagaagatcctgaggaggccgaattgagactggaggctctc
agagctgctcaactggcagtctcccagcaaaagaagataactagtgcttttgatagtgaa
tgccaaaaactacgtgaagcagcagaaactgaagggcagacaaaggactcttcaattgca
ggatctagtaacatagatctacttcatccttctactatgcctgtaacatcatcagtgcag
acgccagagttatttaaaggttcccttaaggaatatcagttaaagggtctgcaatggctg
gtcaattgttatgagcagggtttgaatggtatccttgctgatgagatgggactgggaaag
accatccaagctatggcgttcttggctcatttagctgaggagaaaaatatatggggaccc
ttcctggttgtcgcacctgcttctgtcttgaacaactgggctgatgaaattagtcgtttc
tgccctgacttaagaacacttccatactggggtggacttcaggagaggcagattcttaga
aagaacatcaatccaaagcgtctttatagaagggactctggattccacatattgataacc
agctaccaactgcttgtctcggatgagaagtatttccggcgtgtaaaatggcaatatatg
gtgttggatgaagcacaggcaattaaaagttctaacagtataaggtggaagacattgctc
agtttcaactgtagaaaccgcttacttttgactggtacacccgttcagaataacatggca
gagctgtgggcccttcttcatttcataatgcccaccttatttgacagccatgaacagttc
aatgagtggttttcaaaaggcattgagaatcatgcagagcatggagggactttaaatgaa
caccagctcaacagattgcatgcagttctgaagccctttatgttgcgacgagttaaaaaa
gatgtgataactgagatgactgggaaaaaggaggtcacagtgcactgcaagttgagttct
cggcaacaggctttctatcaagctataaagaataagatatctcttgctgagttgtttgat
ggcagacgaggtcatcttaatgagaagaaaattctgaacttgatgaatatcgtcatccag
ctgaggaaggtctgcaaccatccagagttgtttgaaaggaatgagggaagctcatatctt
tacttcggagagatcccaaattctcttcttcctcctccctttggggagttggaggacata
cactatgctggaggtcggaatcccataacgtacatggtaccaaagctgttccatcaagaa
attgttcaaagtgctgaaatgccttcctcggtattcaatcatggtgtccaaagagaatca
tttgagaaacttttcaatatattctcccccataaatatttataaatctgtactcccatat
gctagaagctcagatgggtcttcccctgttaacagcgggacatttggttttacccatttg
atggatttgtcccctggagaggttgcatttctggcaaaaggttcatttatggaaaagctg
ttgttttccattttgaggtgggatcaacaattcttagatgaactcttagacgtgttcatg
gaatctgagggtgatgatcttcaggaccgtcagcttgatagtgggaaagtgagagctgtt
acaaggatgttactgatgccaactagatctgagtctaatttactcagaaggaagcttgca
actggtcctggtgatgccccatatgaagcattagttgtttctcatcaggataggcttgta
tccaacaccaggcttcttcaatcaacatatgctttcatcccacgagccagagctcctcca
attaatgcccactgctccaatagaaactttgcatacgaaatgctcgaagaactacacaac
ccttgggtgaaacggctattcttcgggtttgcacgcacgtcacagtgtaatggacctaga
gagcctagtggtcctcataatttgatacaagagattgactcagagatacctgtcagccgg
cccattcttcagctcacatacaagatatttgggtcatctccacccatgcaaccctttgac
cctgcaaagatgcttacggactcagggaagcttcaaacgcttgatattttattgaagcgg
ttgcgagctgaaaaccaccgtgtgctcttgtttgcccaaatgactaagatgttgaatatt
cttgaggactacatgaattataggaagtacaggtatcttcgacttgatgggtcttcaact
ataatggatcgacgtgacatggtcagagatttccagcaccggggtgacatttttgtgttt
ttgctgagtacccgagctggtggactgggtattaacttaacagctgctgatactgttata
ttttatgaaagtgattggaatccaaccttggatctacaggcaatggacagagctcatcgt
cttggtcagaccaaggaggtcactgtataccgtttgatttgtaaagaaacggttgaagag
aaaattttgcaaagagcaagtcagaaaaatactgtacagcagttggttatgacaggtggc
catgttcaaggtgacctcctggctcctgaggatgtcgtttccttacttcttgatgatgct
caattggagcagaaactgagagaagctccattgcaggttaaggaacgacagaagaagaaa
cgtgcaacaaagggcatacggctggatgctgagggggatgcatcttgggaagattttgca
aatattcaggattctggctatgaagttactcctgatccggagagtggcaatgctagtaat
aagaggaaagcaagctcagacaagcagactcctccaaaagcgcggtctcagaaagcccca
aaaaccagtgattctttcatggggttggatgaaccccactcaatcgactatgagctagat
aattccgtccagaacagagacttacaacagcataagcccaagaggccaaagagaccgaag
aagagcataaatgagaacattgaaccagcatatactgcacctggcacagtgaccccagag
cctacagaataccctcatgcatataattctgttgatgccggtatcagagccttggaggag
atctcaccttctaaccattcacctacctga
DBGET
integrated database retrieval system
