Telopea speciosissima (New South Wales waratah): 122672868
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Entry
122672868 CDS
T07910
Name
(RefSeq) paired amphipathic helix protein Sin3-like 3 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tss03036
]
122672868
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
122672868
REST complex
122672868
Heterochromatin formation proteins
Other heterochromatin formation proteins
122672868
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
122672868
NCBI-ProteinID:
XP_043726304
LinkDB
All DBs
Position
8:9466139..9480114
Genome browser
AA seq
1025 aa
AA seq
DB search
MSKKPFWNEGHQPKSVKVEDRDKEREREDRERDRDKERERLDKNLTSHKVPSYPNKEKFN
HKPISELDLSNCQRCTPSYRLLPKNYQTPAASQRTNLGAQVLNDNWVSVTSGSEDYSFKH
MRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKITDNTIKPDSPIRIEDHFTA
LNLRCIERLYGDHGLDVMDVLRKNATLALPVILTRLKQKEEEWTRCRSDFNKVWAEIYAK
NYHKSLDHRSFYFKQQDTKSLSTKSLLAEIKEINEKKRKEDDVLLAIAAGNRRPIIPNLE
FEYSDPEVHDDLYQLIKYSCGEVCTTTEQLDRVIRIWTTFLEPMLGVPSRPQGAEDTEDV
VKAKSHVVKSSGASIVESDGSPGVDAAATNSKQSNPARNRDDSMPPEQQGSSCRARIENG
DAMVKEDGLHDGDRGARRADNLSSTSQQGKVQNNVSMAGEMSGVNINATSYDRLTESNAS
LANRTEQSHARTDTEITPGQSTTPSRTGHTATEGGPESRLSNEVLPSPEDGESTRPVIST
NGVVTDGNKVRRYHEESVGRLKVEREEGELSPNGDFEEDSFVVYRDAGVDTLPKAKDSTA
SRQYQARNGDEEEMCCGEAGGENDADADDEGDESAQRSTEDSENASEAGDVSGSESGDGE
ECSREDHEEEEEDADHDVHDAKAESEGEAEGMADAHDVEGDGTLLPYSERFLLTVKPLAK
HVPSVLHDKEKKDSRIFYGNDSFYVLFRLHQTLYERLLSAKMNSSSAERKWRTSIDTSPP
DHYTRFMNALYSLLDGSADNTKFEDDCRAIIGTQSYVLFTLDKLIYKLVKQLQTVATDEM
DNKLLQLYAYEKSRKPGRFVDLVYHENARVLLHDENIYRFECSSSPTHLSMQLMDYGHEK
PEVTAVSMDPNFATYLQNDFLAVLPERKEMRGVFLGRNKRKCACDDEFSGTCKSMDGVQI
VNGLECKIACNSSKVSYVLDTEDFLFRTRRKRICLPGGSSCLDQAKSLNGYAERVQRFHR
LLSGS
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaacctttttggaatgaaggacatcaaccaaaatcagtgaaggttgaggac
agggataaagagcgggaacgtgaagatcgtgaaagggatagggataaagaaagggaaaga
cttgacaaaaatttaacaagccacaaggttccctcttatccaaacaaagagaagtttaat
cataaaccaatttcggagcttgacctctctaattgtcaacgctgtactcccagttatcgg
cttctgccaaagaattatcaaacacctgcagcaagccagagaacaaatcttggtgctcaa
gtattgaatgataattgggtgtcagtgacttcaggaagcgaggattactcttttaaacac
atgcgcaaaaatcaatatgaagaaagcttgtttagatgtgaagatgataggtttgaactg
gacatgttgttagaatcagtgaatgtaactaccaagcgtgtagaggaattgttagaaaag
atcactgataatacaatcaaaccagacagtccaattcggattgaggaccacttcactgct
ctgaatctaaggtgcattgaacgtctatatggtgaccatggtctggatgtgatggatgtg
ttaagaaagaatgcaacacttgcattgcctgttatattaactcgcttgaagcagaaagaa
gaggagtggacgaggtgtcgttcagactttaataaagtctgggctgaaatttatgcaaag
aactatcacaaatctcttgatcatcgtagcttctatttcaagcaacaggatactaagagt
ttgagtacaaaatctttgttggctgagataaaggaaatcaatgagaagaaacgcaaagaa
gacgatgttcttcttgctattgcagctgggaaccgacgacctattattccaaatctggaa
tttgagtactctgatccagaagttcatgatgatctatatcaacttataaaatattcatgt
ggagaagtttgcacaaccacagaacagttggatagagtcatcaggatttggacaaccttc
ttggagcccatgttgggtgttccttctcgtcctcagggtgcagaggacactgaagatgtt
gtgaaggctaagagtcatgtagtcaagagcagtggagcaagcatagtggaaagtgatggc
agtcctggtgttgatgccgctgctactaattccaaacagtcaaaccctgccagaaacagg
gatgatagcatgccacctgagcagcaggggagtagctgcagggctaggatagaaaatgga
gatgccatggttaaagaagatggcttacatgatggagatcgaggtgcccgtcgagctgac
aatctttccagtacttctcagcaaggaaaagtgcagaataatgtctctatggctggtgaa
atgtctggagtcaacataaatgctacttcttatgatcgattgaccgaatctaatgcatca
cttgctaatagaacagaacaaagtcatgctagaacagatactgaaattacaccaggacaa
agcacaactccttcccgaactggtcacactgctaccgagggtgggcccgagtctaggctt
tctaatgaagttttaccttcgccggaggatggggagagtacaaggcctgtcatatcaacc
aatggggtggttacagatggcaacaaggtccgtagatatcatgaagaatctgttggacgc
ttgaaagttgaaagagaggagggtgaattatcaccaaatggggattttgaagaggatagc
tttgtggtatatagagatgctggtgttgacaccttgcctaaagcaaaggatagtactgca
agcagacagtatcaagccaggaacggggatgaagaagaaatgtgttgtggagaggcagga
ggagaaaatgatgccgatgctgatgatgaaggtgacgaaagtgctcaaaggtcaacagag
gacagtgagaatgcctctgaggccggtgatgtctcagggagcgagtctggtgatggtgaa
gagtgctcccgtgaagaccatgaagaggaggaggaagatgcagaccatgatgtgcatgat
gctaaggctgaaagtgaaggtgaggctgaagggatggctgatgcgcatgatgttgaagga
gatggcaccttattgccatattcagaacgttttctactgacagtgaagccacttgcaaaa
catgtcccttcagtgttacatgacaaagaaaagaaggattctagaattttctatggaaat
gattccttctatgtgctttttaggcttcaccaaacactgtatgagagactactctctgcg
aagatgaattcatcatctgctgaaaggaaatggaggacttcaattgatacaagccctcct
gatcactacacaagatttatgaatgcattatacagtttgcttgatgggtctgctgataat
acaaagtttgaggatgactgccgagctataattggaactcagtcatacgtgctgttcact
ttagataaattgatatataaacttgtcaagcagcttcaaacagttgcaactgatgaaatg
gacaataaacttcttcaactatatgcatatgagaaatcaaggaaacctgggagattcgtt
gatttagtttatcatgaaaatgcacgtgttcttcttcatgatgagaacatatatcgattt
gaatgttcatccagtccaactcatttgtccatgcaactgatggactatgggcacgaaaag
cctgaagtaactgctgtttccatggaccctaactttgcaacttacctgcagaatgacttt
ctggcagttcttcctgagaggaaggagatgcgaggtgtttttctggggagaaacaagcgc
aaatgtgcatgtgatgatgaattttctggtacatgcaaatcgatggatggagtccaaata
gtcaatggtctggagtgtaaaatagcttgcaattcatccaaggtgtcctatgttctagat
acagaagacttcttgtttcgcacgagaaggaaaaggatttgtctccctgggggcagctct
tgccttgatcaggcaaagtccttaaatgggtatgctgaaagagtgcagaggtttcataga
ttgttgtctggctcctag
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