Trachemys scripta elegans (red-eared slider): 117867162
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Entry
117867162 CDS
T07347
Symbol
ABCA2
Name
(RefSeq) ATP-binding cassette sub-family A member 2 isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst02010
ABC transporters
tst04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117867162 (ABCA2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117867162 (ABCA2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tst02000
]
117867162 (ABCA2)
Transporters [BR:
tst02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117867162 (ABCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
Motif
Other DBs
NCBI-GeneID:
117867162
NCBI-ProteinID:
XP_034607870
LinkDB
All DBs
Position
17:1123075..1265734
Genome browser
AA seq
2508 aa
AA seq
DB search
MGFLHQLHLLLWKNVTLKRRSPWVLAFEIFIPLVLFFILLGLRQKKPTIPVKEVSFYTAA
PLTSAGILPVMQSLCPDGQRDEFGFLQYSNSTVTQLLERLNEVVEESNLFDPNHPGLEEE
LESLRRQLESLSNSEPSSMETHFDSRAASGFTLGSAVKNQSELHRFLTRNLSLPNETAQL
LLGSNINLKEVYRLFFGSSPASADDAHERQPWDRFSAGEKILQLEESLLGGWRNLEDGLI
HRALRDPKRSTHRQALLHLLSQALGLAGAPSEASASYSPQAFVKEMESILFTPSVLEHLT
CDQDQEELKQILTVPGSRQPWLWAYRATVCNGSASVRREHFTQLAMELKEQLDVHKVVSR
LKLDEVNSTAAQHRLHALLEDLVEMEKVLKDVDILSALAKLLPQGACASKAPPPATNSTS
WGGNFTAGANSTTEEGDREPVGENPQGQRSAFVQLWAGLQPILCGNNRTIEPEALKQGNM
SSLGFTSKEQRNLGLLVHLMTSNPKILYSPVGTEVDKVILKANETFAFVGNVTRYAQVWL
NVSSEIRGFLEEGKLQRRIRWLQEFTTDLHKHPEILNASDNNLLHSFIDGNFSLPNASAL
LQQLDTIDNAACGWIQFMSKVSVDIFKGFPDEESIVNYTLNQAYQDNVTVFASVIFQTNK
DGSLPPHVMYKIRQNSSFTEKTNEIRRAYWRPGPNTGGRFYFLYGFVWIQDMMERAIINT
FVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWVYSVAMMIQHIVAEKEHR
LKEVMKMMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGKVLMHSDVFIIWLFLAIYA
VATIMFCFLVSVLYSKAKLASACGGIIYFLSYVPYMYVAIREEVAHDKITAFEKCIASLM
STTAFGLGSKYFALYEVAGVGIQWHTFSQSPVEGDDFNLLLSMMMLIVDAVVYGVLTWYI
EAVHPGMYGLPRPWYFPFQKSYWLGNGRVETWEWSWPWSRTTRLSIMEEDQACAMENRRL
EETRGIEEEPNHLPLVVCVDKLTKVYKTDKKLALNKLSLNLYENQVVSFLGHNGAGKTTT
MSILTGLFPPTSGSATIYGHDIRTEMDEIRKNLGMCPQHNVLFDKLTVEEHLWFYSQLKS
MAEEEIRKEMDKMIEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAVILDEPTAGV
DPYARRAIWDLILKYKPGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKSTYG
DGYKLTVVKKQSDSRNGTDSGQTHSPPSHSSASPCSEPRVTQFIKKYVASCLLISNTNTE
LSYILPSEAVKKGCFERLFQHLEQSLGELELTSFGLMDTTLEEVFLKVSEEDLSLENSDV
DMKESKKDALQPPAPQMGLKPEANGEPLPDAEAPEKPEVELSNLVACSNLAQSQVSLRSV
SSVGSVRGDEGGAYSEFYGDYSPLFDNLQDPDNVSLQDQEADAEAADQPLGGQGSFKLEG
SWLKLRQFHGLIVKRFHCAKRNTKALFSQILLPAFFVCVAMTVALSVPEIGDLPPLILSP
SQYHNYTQPKGNFIPYANEERREYRIKLSPDASPQQLVNTFHLPSGVGATCVLKTAFNST
LDQLVQTLNLNSNESKMLAAKYFDAMCIDSFTQGLPLSNFVPPPPSPAPSDYPVSLDDDM
VHAWNSTTYPSTVKETVTLAPSLPSIIHEPVRCTCSMQGTGFSCPSGVGGHPPQMKVVTG
DILADITGRNVSEYMLYTSDRFRLHRYGAITVGNVQKSIPASFGAQAPPMVRKIAVRRTA
QVFYNNKGYHSMPTYLNVLNNAILRANLPKSRGNPAAYGITVTNHPMNKTSASLSLDYLL
QGTDVVIAIFIIVAMSFVPASFVVFLVAEKATKAKHLQFVSGCDPVIYWLANYVWDMLNY
LVPATCCIIILFVFDLPAYTSPTNFPAVLSLFLLYGWSITPIMYPASFWFEVPSSAYVFL
IVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNLGHGLMEMAYNEYIN
EYYAKIGQFDKMKSPFEWDIVTRGLVAMTIEGFVGFFITIMCQYNFLRKPQRLPVSNKPI
EDDVDVANERHRVLRGDADNDMLKIENLTKVYKSRKIGRILAVDRLCVGVRPGECFGLLG
VNGAGKTTTFKMLTGDESTTGGEAFINGHSILKELLQVQQSLGYCPQFDALFDELTAQEH
LELYTRLRGIPWKDEERVVKWAMKKLELTKYADKPASTYSGGNKRKLSTAIALIGFPAFI
FLDEPTTGMDPKARRFLWNLILDIIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLKCLG
SIQHLKNRFGDGYMITVRTKSSLSVKEVVRFFNRNFPEAILKERHHTKVQYQLKSEQISL
AQVFSKMEQVVDVLGIEDYSVSQTTLDNVFVNFAKKQSDNLEQQETSPNCSIQSPLEHIL
SLLRPRAAPTELRALVVEEPEDLETDDEGLISFEEERAQLSFNTDTLC
NT seq
7527 nt
NT seq
+upstream
nt +downstream
nt
atggggttcctgcaccagctgcatctcctgctctggaagaacgtgactctcaagcgcagg
agcccgtgggtgctggccttcgagatcttcatccccttggtcctcttcttcatcctcctg
gggctgcggcagaagaagcccaccatccccgtgaaggaagtctctttctacacagcagcc
ccgctcacttcggctgggatcctgccggtgatgcagtccttatgtcccgatggccagaga
gatgagtttggattcctgcagtattctaattccaccgtgacccagctcctggagcggctc
aatgaggtggtggaagagagcaacctgtttgacccgaatcaccctgggctggaggaggag
ctggagtccctgcggcggcagctggagtcgctcagcaacagcgagcccagctccatggag
acccacttcgacagccgggcagcgtccggcttcacgttgggctccgcggtgaagaaccag
agtgaacttcatcgcttcctcactcggaacctctccctgcccaatgagacggcccagctg
ctgctaggctccaacatcaacctcaaggaggtctatcgcctgtttttcggctcctcgccc
gcctcggcagatgacgcccacgagagacagccctgggaccgattcagcgctggggaaaag
attctccagctggaggagagccttctgggcgggtggaggaacctggaagatgggctgatc
cacagggctctgcgcgaccccaagagatccacccacaggcaggccctcctgcacctcctg
tcccaggccctgggcctggccggcgcaccctccgaggcctctgcttcctacagcccccag
gcctttgtgaaggagatggagagcatcctcttcacgccatcggtgctggagcacctgacc
tgtgaccaggatcaggaggaactgaagcagatcctgactgttcctgggagccggcagccc
tggctgtgggcctaccgggccaccgtctgcaacgggagcgccagcgtccgccgggagcac
ttcacccagctggcgatggagctcaaggagcagctggacgtgcacaaagtcgtcagcagg
ctcaagctggatgaggtgaacagcacggcggcccagcaccggctccacgccctcctggag
gacctcgtggagatggagaaggttctgaaggacgtggacatcctctcggctctggccaag
ctgctgccccagggcgcctgtgccagcaaagcacccccgcccgccaccaacagcaccagc
tggggtggcaacttcaccgccggcgccaactccaccacggaggagggcgacagggagccc
gtgggagagaacccccagggccagcgctcggccttcgtgcagctctgggcaggactgcag
cccatcctctgcgggaacaaccgcaccatcgagcccgaggccctgaagcagggcaacatg
agctccttgggcttcaccagcaaggagcagcgtaacctgggactgctggtgcacctcatg
accagcaatcccaagatcctttactcgcctgtcgggacggaggtggacaaggtcatcctg
aaggccaatgagacctttgccttcgtcgggaacgtgactcgctacgcccaggtctggctg
aatgtctcctctgagatccggggcttcctggaggagggcaaactgcagcggcggatccgc
tggcttcaggagttcaccaccgacctccacaaacaccccgagatcctgaacgcttcggac
aacaacctcctccacagcttcatcgacggcaacttctcgctgcccaacgccagcgccctg
ctgcagcagctggacaccatcgacaacgccgcctgcggctggatccagttcatgtccaag
gtcagcgtggacatcttcaagggcttccccgacgaggagagcattgtgaactacacgctg
aaccaggcgtaccaggacaacgtcacggtgtttgccagtgtgatcttccagaccaacaag
gatggctccctgcccccccacgtgatgtacaagatccggcagaactccagtttcaccgag
aagaccaacgagatccggcgggcatactggcggccgggccccaacacgggcgggcgcttc
tacttcctctacggtttcgtgtggatccaggacatgatggagcgagccataatcaacacc
ttcgtgggccacgacgtagtggagcctggcaactacgtgcagatgttcccgtacccgtgt
tacaccagggacgatttcctgttcgtcatcgagcacatgatgcccttgtgcatggtgatc
tcctgggtctattcggtggcaatgatgatccagcacattgtggcggagaaggagcatcgg
ctgaaagaggtgatgaagatgatgggcctgaacaacgcagtccactgggtggcctggttc
atcaccggctttgtccagctctccatctccgtcaccgcgctcaccgccatcctgaaatac
ggcaaggtcctgatgcacagcgacgtcttcatcatctggctcttcctcgccatctacgcc
gtggccaccatcatgttctgtttcctggtgtccgtgctctattccaaggccaagctggcc
tcagcctgcgggggcatcatctacttcctgagctacgtcccctacatgtacgtcgccatc
cgggaggaagtggcccacgacaagatcacggccttcgagaagtgcatcgcctctctcatg
tcgaccacggccttcgggctgggctccaagtactttgcgctgtatgaggtggccggcgtg
ggcatccagtggcacaccttcagccagtcgcccgtggaaggcgacgacttcaacctgctg
ctctccatgatgatgctgatcgtggatgccgtggtctatggtgtgctgacgtggtacatc
gaggccgtgcacccaggcatgtacgggctcccccggccctggtacttccctttccagaaa
tcctactggctcgggaacgggcgggtcgaaacctgggagtggagctggccctggtctaga
accacccgcctcagcatcatggaggaggatcaggcctgcgccatggagaacaggcggctg
gaggagacgcgtggcatagaggaggagccgaaccacctgccgctcgtcgtgtgcgtggac
aagctcaccaaggtctacaagacggacaagaagctggcactgaacaagctgagcctgaac
ctctacgagaaccaagtggtgtccttcctggggcacaacggggcgggcaagaccaccacc
atgtccatcctgactggcctcttccccccaacttcgggctctgctaccatctacggccac
gacatccggacagagatggacgagatccggaagaacctgggcatgtgtccccaacacaac
gtgctcttcgataaactgacggtggaggagcacctctggttctactcgcagcttaagagc
atggcggaggaggagatccgcaaggagatggacaagatgatcgaagacctggagctgtcc
aacaagcggcactccctggtgcagactctgtcaggagggatgaagaggaagctgtcggtg
gccatcgcctttgtgggtggatcgcgggctgttatcttggatgagcccactgctggtgtt
gacccgtacgcacgtagggccatttgggatctgatcctcaagtacaaacctggaaggacc
atcctgctctccacacatcacatggacgaggccgacctgctcggggaccgcatcgccatc
atctcccatggcaagctcaagtgctgcggctccccactcttcctcaagagtacctacggg
gacggctacaagctgacggtggtgaagaagcagtcagactccaggaacggcacagactcg
gggcagacgcacagccctccctcccactcctccgccagcccctgctcggagccccgcgtc
acccagttcatcaagaagtacgtggcctcctgcctgctgatctccaacaccaacacggag
ctctcctacatcctgcccagcgaggccgtcaagaagggctgcttcgagaggctcttccag
cacctggagcagagcctgggggagctggagctgaccagcttcgggctgatggacactacc
ctggaggaggtcttcctcaaggtgtcggaggaggacctgtcgctggagaacagcgatgtc
gacatgaaggagtccaagaaagacgctctgcagccaccggctccccagatgggcctgaag
cccgaggccaacggggagccccttcctgacgcggaggcacccgagaagccggaggtggag
ctcagcaacctggtggcctgctccaacctggcccagtcgcaggtgtccctgcgctcggtg
tcctctgtgggctccgtgcggggcgatgaaggtggggcttattcggagttctatggggat
tattctccgttgtttgataatctgcaggaccccgataacgtcagtctgcaagaccaagag
gctgacgccgaggctgcggaccagcccctggggggacaggggagctttaagctggagggc
tcctggctcaagctgcgccagttccatgggctgatcgtcaaacgcttccactgcgccaag
cgcaacaccaaggccctcttctcacagatcctgctgcccgccttcttcgtctgcgtggcc
atgacggtggcgctctctgtgcctgaaataggtgacctgcctcctctgatcctctcgccg
tcccagtatcacaactacacccagcccaagggcaacttcatcccctatgccaatgaggag
cggcgcgaataccgcataaagctgtcgcccgacgccagcccccagcagctcgtcaacacc
ttccacttgccttccggggtgggggccacctgtgtgctgaagacggccttcaatagcacc
ctggaccagctggtgcagaccctgaacctcaacagcaacgagtccaagatgctggcggcc
aagtacttcgacgctatgtgcatcgattccttcacccagggcctgccgctctccaacttc
gtgccaccgcccccctccccggccccctccgactaccccgtctccctggatgacgacatg
gtgcacgcctggaactccaccacttatccctccactgtcaaagagaccgtcactttggcc
ccgtccttgcccagcatcatccacgagcccgtcagatgcacctgctccatgcaggggacg
ggcttctcctgtcccagcggcgtgggaggccacccgccccagatgaaggtggtgacgggg
gacatcctggcggacatcaccgggcgcaacgtctcggaatacatgctgtacacgtcggac
cgcttccggctgcacaggtatggagcgatcaccgttggcaacgtccagaaatccatccca
gcgtcctttggcgcccaggcccctcccatggtgcggaagatcgcagtcaggagaacagcc
caggtcttctacaacaacaagggctaccacagtatgcccacctacctgaacgtgctgaac
aacgccatcctgcgggccaacctgcccaagagcagagggaaccccgccgcctacggcatc
acagtgaccaaccatccgatgaacaagacgagcgccagcctctccctggattacctcctg
caaggcacggatgtggtcatcgccatcttcatcattgtggccatgtccttcgtgccagcc
agcttcgtggtgttcctggtggctgagaaggctaccaaagccaagcacctgcagttcgtg
agcggctgcgacccggtgatctactggctggccaactacgtgtgggacatgctgaattac
ctggtgccggccacatgctgcatcatcatcctcttcgtgttcgacctcccggcgtatacg
tcccccaccaacttcccagccgtcctctcgctcttcctgctctatggctggtccatcacc
cccatcatgtacccagcctccttctggttcgaggtgcccagctcagcatacgtcttcctg
atcgttatcaacctcttcattggcatcacggccactgtcgccaccttcctgctgcagctc
ttcgagcacgacaaggacctgaaggtcgttaacagctacctgaagagctgcttcctcatc
ttccccaactacaacctgggccacgggctgatggaaatggcctacaatgagtacatcaac
gaatactacgccaagatcgggcagtttgataaaatgaaatcaccctttgagtgggacatt
gtgacccggggcctggtcgccatgacgattgaaggcttcgtaggtttcttcatcaccatc
atgtgccaatataacttcctccggaaaccacagcggctgcccgtctccaacaagcccatt
gaggacgacgtcgacgtggccaacgaacggcaccgggtcctgcgcggcgatgccgacaac
gacatgctcaagattgagaatctcaccaaggtgtacaaatcccgcaagatcgggcgcatc
ctggccgtggaccgtctgtgcgtgggcgtgcggcccggggaatgcttcgggctgctgggc
gtcaatggggcggggaagaccaccaccttcaagatgctgactggggacgagagcaccacc
ggaggggaggccttcatcaatgggcacagcatcctgaaggagctcctccaggtacagcag
agcctgggttactgcccgcagtttgacgcgctgtttgacgagctcacggcgcaggagcac
ctggagctctacacccggctgcgtggcatcccctggaaggacgaggagagggtggtgaag
tgggcgatgaagaagctggagctcaccaaatacgccgacaagccggccagcacctacagc
gggggcaacaagaggaagctgtccacggccatcgccctgattggcttccctgccttcatc
ttcctggatgagccgacgacgggcatggaccccaaggcccggcgcttcctgtggaacctc
atcctggacatcatcaaaacgggccgctctgtggtgctgacgtcccacagcatggaggag
tgcgaggcgctctgcaccaggctggccatcatggtgaacgggcggctcaagtgtctcggc
agcatccagcacctgaaaaacaggtttggagatggctacatgatcacggtgcggaccaag
tccagcctcagcgtcaaggaggtggtgcggttcttcaacaggaacttccccgaggccatc
ctcaaggagcgacatcacaccaaggtgcagtaccagctcaagtctgagcagatctcgctg
gcccaggtcttcagcaagatggagcaggtggtggacgtgctgggcatcgaggattactcc
gtcagccagaccacactggataacgtgtttgtgaattttgccaagaagcaaagcgacaac
ctggagcagcaggagaccagccccaactgctcgatccagtccccgctggaacacatcctg
agcctgctgcggccccgcgccgcccctaccgagctgcgggccctggtggtggaggagccc
gaggacctggagacagatgacgagggcttgatcagcttcgaggaggagagggcacagctc
tccttcaacacggacactctctgctga
DBGET
integrated database retrieval system
