Trachemys scripta elegans (red-eared slider): 117867165
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Entry
117867165 CDS
T07347
Name
(RefSeq) POU domain, class 5, transcription factor 3-like
KO
K09367
POU domain transcription factor, class 5
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117867165
03021 Transcription machinery [BR:
tst03021
]
117867165
Transcription factors [BR:
tst03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
117867165
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
117867165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117867165
NCBI-ProteinID:
XP_034607877
LinkDB
All DBs
Position
17:1041857..1059135
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AA seq
417 aa
AA seq
DB search
MFSQEMSLGAGILQDASGQFGKSSYSSSPQPPPFFPFPAVKAEYDPPELPAGEAKPWCPF
PGPEPCHQPGMAGGHQGPPLLGSGQAPKEEPGQEKGRRQGSPEAKCALLPAGPYYAHPWS
SPFWPALAGHSAAAARGPLPSQTFPGVGLCPGAPHAIYPSDPHQPPSGLSSLGSSGSSSG
AASEGGQSSESGDEDATPTSEELEQFAKDLKHKRITLGFTQADVGMALGTLYGKMFSQTT
ICRFEALQLSFKNMCKLKPLLQRWLNEVENSDSLQELCNAEQALAQARKRKRRTSIENNV
KGTLESFFRKCVKPSPQQISQIAEDLNLDKDVVRVWFCNRRQKGKRLLLPFGDENEGAMY
DMNLALAHPALPAAVSSQAYAPAPLASPPPIYMSAFHKGEICPQALQPAVSMGNSGN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtttagccaggagatgtccctgggggccgggatcctgcaggatgcgagcggccagttc
ggcaaaagcagctacagcagcagcccccagccgccgcctttcttccccttcccagcggtg
aaagcggagtacgacccccccgagctgccggcgggggaggctaagccctggtgccctttc
ccgggcccagagccctgccaccagccgggcatggctgggggacaccagggcccccctctc
ctgggaagcgggcaggccccgaaggaagagcccggccaggagaaggggcgcagacaaggc
tccccagaagcgaaatgcgccctcctgcccgcgggcccctactacgcccacccctggagc
agccctttctggcctgccttggctggccacagcgcggcggcggcccgcggccccctcccc
agccagacgttcccgggggtcgggctttgccccggggccccccacgccatctaccccagc
gacccgcaccagccccccagcggcctctccagcctgggcagcagcggcagctccagtggg
gcggctagcgagggaggccagtccagtgagagtggggacgaggacgccactcccacctcg
gaggagctggagcagtttgccaaagacctcaagcacaagcgcatcaccctggggttcacg
caggctgacgtggggatggctctggggacactctatgggaagatgttcagccagacgacg
atctgccgcttcgaagccctccagctgagcttcaagaacatgtgcaagctgaagccgctg
ctgcagcgctggctcaacgaggtggagaacagcgacagcctgcaagagctgtgcaatgca
gagcaagcgctggcccaggcccggaagaggaagcgcaggaccagcatcgagaacaacgtc
aagggcacgctagagagcttcttccgcaagtgcgtaaagccgagcccccagcagatctcg
cagatcgccgaggatctcaacctggacaaagacgtggtgcgagtctggttctgcaaccgg
cgtcaaaagggcaagcggctgctgctgcccttcggcgatgagaacgagggagccatgtac
gacatgaacctggccctggcgcacccagccctgcccgccgcagtgagctcccaagcctat
gccccggcccccctggcctcgccccctcccatctacatgtcggctttccacaagggtgag
atctgccctcaagctttgcagccggcagtctccatggggaacagcggcaactga
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