Trachemys scripta elegans (red-eared slider): 117867305
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Entry
117867305 CDS
T07347
Symbol
POLR2J
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03020
RNA polymerase
tst03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117867305 (POLR2J)
09124 Replication and repair
03420 Nucleotide excision repair
117867305 (POLR2J)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tst03021
]
117867305 (POLR2J)
03400 DNA repair and recombination proteins [BR:
tst03400
]
117867305 (POLR2J)
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
117867305 (POLR2J)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
117867305 (POLR2J)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
117867305
NCBI-ProteinID:
XP_034608076
LinkDB
All DBs
Position
18:complement(18917138..18924289)
Genome browser
AA seq
117 aa
AA seq
DB search
MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccgccggccttcgagtccttcctgctcttcgagggggagaagaagatcaca
attaataaggatacaaaagtaccaaatgcctgtttgtttacaatcaacaaggaagaccac
acacttggaaatattattaaatcgcaattactgaaagaccctcaggtgttgtttgcagga
tacaaggtcccacatcctctggaacataaaatcatcattcgagttcagaccactcctgat
tacagtccccaggaagctttcaccaatgctatcacggacctgatcagtgaactctccctt
ctggaggagagattcagggttgccatcaaagataaacaagaaggaattgaatag
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