Trachemys scripta elegans (red-eared slider): 117867315
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Entry
117867315 CDS
T07347
Name
(RefSeq) trifunctional purine biosynthetic protein adenosine-3
KO
K11787
phosphoribosylamine--glycine ligase / phosphoribosylglycinamide formyltransferase / phosphoribosylformylglycinamidine cyclo-ligase [EC:
6.3.4.13
2.1.2.2
6.3.3.1
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00230
Purine metabolism
tst00670
One carbon pool by folate
tst01100
Metabolic pathways
Module
tst_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
117867315
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
117867315
Enzymes [BR:
tst01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.2 phosphoribosylglycinamide formyltransferase 1
117867315
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.3 Cyclo-ligases
6.3.3.1 phosphoribosylformylglycinamidine cyclo-ligase
117867315
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
117867315
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GARS_A
Formyl_trans_N
GARS_N
AIRS_C
GARS_C
AIRS
ATP-grasp
ATP-grasp_2
CPSase_L_D2
RimK
Sacchrp_dh_NADP
Dala_Dala_lig_C
ATP-grasp_3
Motif
Other DBs
NCBI-GeneID:
117867315
NCBI-ProteinID:
XP_034608092
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Position
1:complement(185624064..185677894)
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AA seq
1010 aa
AA seq
DB search
MADQVLVIGGGGREHALAWKLAQSPHIKRVLVAPGNAGTANNGKISNSAISISNHDALVQ
FCKDNEIKLVVVGPEVPLAAGIVDDLTGAGVRCFGPTAKAAQLETSKSFAKAFLDRHGIP
TARWKAFTNPEDACSFITSVDFPALVVKASGLAAGKGVIVATNKEGACKAVHEIMQDKTF
GAAGETVVVEELLVGEEVSCLCFTDGVTVAPMPPAQDHKRLMDGDQGPNTGGMGAYCPAP
QISKDLLLKIRDTILQKTVDGMKEEGVPYIGVLYAGLMLTSDGPKVLEFNCRFGDPECQV
ILPLLKSDLYEVIQATINRKLSSSMPVWSEDSAAMTVVMASEGYPGNYAKGLEITGLSKA
KELGVEVFHAGTAVKDGKVVTNGGRVLTVTAIKKDLMAALGEANKGVAAIHFKGAIYRKD
IGYRAIAFLSNSRGLTYKNSGVDIAAGNTLVQKIKPLAAATSRPGCNAELGGFAGLFDLK
AAGYKDPILVSGTDGVGTKLKIAQMCKKHDTIGQDLVAMCVNDILAQGAEPLFFLDYFAC
GKLDVEVSQAVIAGIAEACKKAGCALLGGETAEMPGMYLPGEYDLAGFAVGAVEQGQMLP
QLERVADGDVVIGIASSGVHSNGFSLVRKIVEKSSLDFTSPSDGGSGDQTTLGELLLTPT
KIYSKTLLPVLRSGRVKAYAHITGGGLLENIPRVLPESFGVVLDAHSWRIPEIFSWLQKE
GNLSEEEMARTFNCGIGAVLVVEKALAQQVLKDVQRHEEAWLIGKVISRHTESAHVEINN
LLQALQANRLQFLHNHIQGKTQTSKVKVAVLISGTGTNLEALITSTKKPTSYAQIVLVIS
NKSGVEGLRRAERAGIPTKVIDHKLYGSRTEFDNAVDKVLEEFSVELICLAGFMRILSGP
FVKKWDGKILNIHPSLLPSFKGANAHKLVLQAGVRISGCTVHFVAEEVDAGAIIFQEAVP
VKIGDTEETLSERVKEAEHRAFPAALQLVASKAVCLGESGKIFWNLEQRN
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcaagtgcttgtgattggtggcggaggcagagaacatgccctggcctggaaa
ttagcacagtcaccacatataaaacgagtgctagtcgctccaggaaatgcaggaacagcc
aataatggaaaaatttcaaattcagccatctcaatcagtaatcatgacgctcttgtccag
ttctgcaaagacaatgagatcaaacttgtggtggtgggcccagaagttcctcttgcggct
ggcattgtggatgacttgacaggagctggggttagatgttttggtcctacagccaaggca
gctcagctagagaccagtaagagttttgctaaagcctttctggaccggcatgggatccca
actgcaagatggaaagcattcaccaaccctgaagacgcttgtagctttattaccagcgtg
gactttcctgccctggttgtaaaagctagtggtctggctgctggcaaaggagtaattgtg
gctactaacaaagagggagcctgcaaagctgtgcatgaaatcatgcaggataagactttt
ggagcagctggggaaactgttgttgttgaagaacttcttgtaggagaagaggtttcttgc
ttgtgcttcactgatggtgtcactgttgctcccatgccaccagcccaggatcacaaacgg
ttaatggatggagaccagggcccaaacactggagggatgggagcttactgtccagcacca
cagatttccaaagatttgctgctgaaaatcagagatactattcttcagaaaacggttgat
gggatgaaagaagagggtgtcccttatattggtgtgctatatgctggattaatgcttacc
agtgatgggccaaaggttctcgagtttaactgcaggtttggtgacccagagtgtcaggta
atccttccattattgaagagtgatttgtatgaagttatacaagcgacaatcaatagaaag
ctgtctagctccatgcctgtttggtctgaagacagtgcagccatgactgtggtcatggct
agtgaaggttatccaggaaactatgccaagggcttggaaataacaggactttctaaggct
aaagaactaggggtggaggtgttccatgcaggcacggcagtaaaggatggcaaagtagtg
actaatggtggaagagtccttacggtaacggctatcaagaaggatctgatggcagcacta
ggagaagccaacaaaggagtagcagccatacacttcaagggtgccatttacagaaaggac
attggttatcgggctatagctttcctcagcaattccagaggcctgacttacaaaaacagt
ggggtagacatcgcagctggcaataccttggttcagaaaattaaacccttagcagcagcc
acctcaaggccaggctgcaatgcagagctcggaggatttgctggtctctttgacttgaaa
gcagctggttacaaagatcctatcttggtgtctggaactgatggtgttggaacaaaactc
aagattgcacagatgtgtaagaaacatgacaccattggccaggacttggttgccatgtgt
gtcaatgacatcctggctcagggagcagagcccctcttcttcctcgactattttgcctgt
gggaaacttgatgttgaagtgtctcaagcagtcatagcgggaatagctgaagcttgtaaa
aaggcaggatgcgctctcttgggaggagagactgctgaaatgcctggcatgtatctgcct
ggggagtatgacctcgctggctttgcagttggtgccgtggaacaaggacagatgctcccc
caactggagagagttgctgatggggatgttgtcattggaatagcttcctctggggttcac
agcaatgggtttagccttgtaaggaagattgtagaaaagtcgtctttagatttcacttct
ccatcagatggtggctctggtgaccagacgacgttaggggaactattgttaaccccaact
aaaatctacagtaaaactctgttgcctgtccttcgttcagggcgtgttaaggcctacgcc
cacatcactggaggaggtctgttggaaaatatcccccgagttctcccagaatcatttggt
gtagttttagatgctcacagttggcggatacctgaaatcttctcttggcttcaaaaagag
ggaaatctctcagaagaggagatggcccgaacatttaattgcgggattggtgcagtcttg
gtggtagagaaggcactggctcagcaggttctgaaagacgttcagagacatgaggaagcc
tggctgattgggaaagtcatctcccgacacacagaatctgcccatgttgaaatcaataat
ctgcttcaagccttacaagcaaataggttacagtttttgcacaaccatatccaaggcaaa
acccaaacaagcaaagtgaaggtggctgttctcatctctggaacaggcacaaaccttgaa
gccctaataaccagcacaaaaaagccaaccagctacgcccagatagtccttgtcatttct
aacaagtcaggcgtggaagggttaagaagagctgaaagagctggtattcctacaaaagta
attgaccataaattgtatggaagtcgcacagaatttgataatgcggttgataaagtcctt
gaagaattctcagttgaactgatctgtcttgcaggatttatgcggattttgtctggtccc
tttgtcaaaaagtgggatggaaaaatactgaatattcatccatctttactaccttctttt
aaaggagcaaatgcccataaattggtattacaagctggagtccgaatcagtggctgtact
gtgcactttgtagctgaggaagtcgatgctggagctataatttttcaagaggcagttccc
gtgaagattggagacacagaggagaccttgtcagaaagagtaaaagaagcagagcacaga
gccttccctgctgccttgcaactagtggccagtaaggcagtctgcctaggcgaaagtggc
aagatcttctggaatttagaacagcggaattga
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