Trachemys scripta elegans (red-eared slider): 117867351
Help
Entry
117867351 CDS
T07347
Symbol
SMYD4
Name
(RefSeq) SET and MYND domain-containing protein 4
KO
K24634
SET and MYND domain-containing protein 4 [EC:2.1.1.-]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tst04990
]
117867351 (SMYD4)
Domain-containing proteins not elsewhere classified [BR:
tst04990
]
Zinc finger domain-containing proteins
MYND-type zinc finger domain-containing proteins
117867351 (SMYD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
TPR_2
zf-MYND
TPR_12
TPR_16
TPR_BSK1_C
TPR_NPHP3
ANAPC3
TPR_10
TPR_7
Defensin_5
DUF7836
Motif
Other DBs
NCBI-GeneID:
117867351
NCBI-ProteinID:
XP_034608155
LinkDB
All DBs
Position
18:complement(636797..>648192)
Genome browser
AA seq
803 aa
AA seq
DB search
MELPAGEWAAYARRRWASLDPCLQQKLSLAGPLGDTFLLCLPLFQPADGEFLHSLAARNR
VGKDPRAALFYKEEGNKRFQNKEYTAALILYSKAVSHNSPEMSLCYANRSAALFHLGHFE
DCLEDIDRAQAQSYPNRLQPKILLRKTECLLLLGRLQEAAEVISKAESKIAMDQSLTSTT
RQSLLRKISQLKVNAHEMESSPVSVPEAPSKTRKDLEFWEENGKISSAFSSVSLNFNSCR
GRHLVATRDILPGENLVKEEAFVSVLSPGKSLLLQDSAETTWDTRVTNADLHCHRCLKQL
LASVPCEGCSYAKYCSKKCAQLAWEHYHSTECPLGALLLTLGVFSHVALRTVLVAGFAEV
SSLMKQFHEDDKELHKAEARGRSRDETRDSAAGMEGLSEKAEPLIPGCEDDGQYRGSYQA
VFNLLTHAEKHSPEHKFLCSLSIVAICKKLQEVDLTILSQGSRESQSKLKAHAKMSTDLS
LELKILGEAMLRHMLQLHCNAQAVTAIRESESGDSIVADSEQVRLATALFPVTSLLNHSC
DPNTSVTFSGTAVTVRASQPIPRGQEIVHCYGPHRCRMGAAERRQRLLCQYFFECRCQAC
LDELESDITGIAATGDIFCCSSCHASMQGEDVLRCSSGACTLLVGRDYLLRQLWDLRLQV
RTALGLLKDNQPNQAVELLMRCRVDAENFLSAEHMLVGEIEDHLAQGYATLGKWQEAARH
LRRSIQIVEARHGPSSVETGHELFKLAQILFNGFAVSEALCTIQRAETVLCVHCGPQNAQ
VQELQEMRACLLELPRSLLHRVE
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcctgcgggggagtgggcggcctatgcacgtcggaggtgggcctcgctggac
ccctgcctgcagcagaagctctctctggcagggccacttggggacaccttcctcctgtgc
ctgcctctcttccagcccgccgatggagagttcctgcacagcctggctgcccgaaaccgg
gtggggaaggatccgagagctgcacttttctacaaggaggaggggaacaagagatttcaa
aacaaggaatacacagccgcactgatactctattccaaggcagtgtcccacaacagccca
gaaatgtcattgtgttatgccaatcgttctgcagccctctttcacttgggtcactttgag
gattgtctagaagacattgacagggctcaagcccagagctatccaaacagattgcagcct
aagatcttgctgcggaaaactgagtgtctgcttcttctggggagattacaggaggcagca
gaggtcatcagcaaagcagagagtaaaatagctatggatcagagtctgactagtaccaca
cgccagagtctgctaagaaaaatcagtcaacttaaagtgaatgcacacgagatggagagt
agcccagtatcggtgccggaagcacccagcaaaactcgaaaggacttggaattctgggaa
gaaaatggtaaaatttcaagtgcattttcatctgtgagcttgaactttaactcctgcaga
ggacgtcatctggttgccaccagagatattctgccaggggagaacttggtgaaagaggag
gcctttgtaagtgtgctcagcccagggaagagcctgttgctccaggacagtgctgaaacc
acctgggatactagggtcactaatgcggacctccactgtcatcgctgcttgaagcagctc
ttggcttcagtgccctgcgaggggtgtagctatgccaagtactgcagcaagaagtgtgca
cagctggcatgggagcactatcacagtacagagtgcccattaggggcattgctgctcaca
ctaggggtcttctcccatgttgccttaaggactgttctagtggctggatttgcagaggtt
agcagcttaatgaagcaatttcatgaagatgacaaggaacttcacaaggctgaagccaga
ggtaggagtcgggatgagacacgagattccgcagctggcatggagggtctctctgagaaa
gcagaacctttgattccgggttgtgaggatgatggacagtaccggggttcttaccaagct
gtcttcaaccttttgacccatgctgaaaagcacagtcctgaacataagttcctttgcagc
ctgagcatagtagccatatgcaagaaactgcaagaagtagatctgaccattttgagtcag
gggtcacgtgagagccagtccaaactgaaagcacatgcgaagatgtctactgacttgtct
ctggagctgaagattctgggagaagcaatgctgagacatatgttgcagctgcactgtaat
gcgcaagcagtgactgcaatccgggagtcagagtctggagacagcattgttgcagatagt
gagcaggtgcgcctggccacagccctattcccagtcaccagcctcctgaaccattcctgc
gaccctaatactagtgtgactttcagtgggactgctgtcacagtcagggcatcacagcca
atcccaagaggccaagagattgtccattgctatgggcctcaccgatgcagaatgggggct
gctgagaggcggcaacggctcctttgtcagtatttctttgagtgtcgatgccaggcctgc
ctggatgagttggagtctgatatcacaggcatagcagccacaggggatatattctgctgt
tccagctgccatgcttcaatgcagggggaagatgtgcttcgttgttccagtggtgcttgt
acactattggttggcagggattacctcctacgccagttatgggaccttcggctgcaagtt
agaacagcactgggacttctcaaagacaaccagcccaatcaggctgtggagctactgatg
aggtgccgggtggatgctgagaatttcctgtctgcagagcacatgctggtgggtgagatt
gaggatcacctggcacagggttatgccacacttggaaagtggcaggaagcagcgaggcac
ctgcggcgcagcattcaaattgtggaagctcgccatggaccgtccagtgtggaaacgggt
catgaactcttcaaactggcacagatcctctttaatgggtttgcagtgtctgaagctctg
tgcacaattcaaagagcagagacagttttgtgtgtgcactgtggccctcagaatgcccaa
gtccaggaactgcaggagatgagagcctgtctgctggagctgcccagaagcctccttcac
agggttgagtga
DBGET
integrated database retrieval system
