Trachemys scripta elegans (red-eared slider): 117867389
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Entry
117867389 CDS
T07347
Symbol
TNFAIP1
Name
(RefSeq) BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2
KO
K15074
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117867389 (TNFAIP1)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
117867389 (TNFAIP1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB_2
BTB
BTB_3
SHPRH_helical-2nd
Motif
Other DBs
NCBI-GeneID:
117867389
NCBI-ProteinID:
XP_034608258
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All DBs
Position
18:9727330..9740442
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AA seq
313 aa
AA seq
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MSGDTCLTTICRSSGAKPKTCSFKEGSLGNKYVRLNVGGSLYYTTVQVLTRHDTMLKAMF
SGRMEVLTDKEGWILIDRCGKHFGVILNYLRDDTIALPKNRQEIKELMAEAKYYLIQGLV
DMCQAALQDKKDSYEPVCNIPIITSPKEEERLIESSMKPVVKLLYNRSNNKYSYTSNSDD
NLLKNIELFDKLSLRFNGRVLFIKDVIGDEICCWSFYGQGRKLAEVCCTSIVYATEKKQT
KVEFPEARIYEETLNVLLYETPRVPDNSLLEATSRNRSQASHSEDDEGFELRDRVRRIHV
KRYSTYDDRQLGH
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggacacgtgcctgaccaccatctgccgatcttcaggtgccaagcccaaaacc
tgcagcttcaaagagggtagcctgggcaacaagtatgtgcggctcaacgttggggggtcc
ttgtactacaccacagtgcaggtgctgaccaggcacgacaccatgctgaaggccatgttc
agtggcaggatggaagtgctgactgacaaggaagggtggatcctcatagaccgttgtggg
aaacactttggtgtgattttaaattacctccgagacgacactattgcgcttccaaaaaac
aggcaggagatcaaagagctgatggcagaagcgaaatattacctaattcagggcttagta
gacatgtgccaggcagctctccaggacaagaaagactcgtacgagcccgtctgtaacatc
cccatcatcacgtctccaaaggaagaagagaggctcatcgaatcctccatgaaacctgtt
gtcaagttgctttataacaggagcaacaacaaatattcctacaccagtaactcggacgat
aacttactgaagaacatcgaactgttcgataaactttctctccgcttcaacggccgagtc
ctcttcattaaggatgttataggggatgaaatctgctgctggtctttctacggacagggg
cggaagctcgctgaggtctgttgcacctcgatagtgtacgccacggaaaagaaacaaacc
aaggttgagttccccgaagcgcgtatctacgaggagacgctaaacgttttactttatgaa
actccacgtgtacctgacaactccctgctggaggcgacgagccggaaccgaagccaggca
tctcacagcgaggacgatgagggctttgaactgcgcgaccgagtgcgccgcatccacgtg
aagagatacagcacttatgacgaccggcagcttggccactag
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