Trachemys scripta elegans (red-eared slider): 117867414
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Entry
117867414 CDS
T07347
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tst03021
]
117867414 (SUPT6H)
03036 Chromosome and associated proteins [BR:
tst03036
]
117867414 (SUPT6H)
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
117867414 (SUPT6H)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
117867414 (SUPT6H)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
117867414
NCBI-ProteinID:
XP_034608306
LinkDB
All DBs
Position
18:1417609..1449942
Genome browser
AA seq
1722 aa
AA seq
DB search
MSDFVESEAEESEEEYNDDGEVVPRANKKFVEEEDDEEEEEENLDDQDEQGNLKGFINDD
DDEEEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVRK
MSDDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVDAPIAPPEEEEEDEEDESDID
DFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEYEY
EDEEAEGEIRVRPKKTAKKRVSRRSIFEMYEPSELESSHLTDQDNEIRVTDMPERFQLRS
IPVKSAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQASSSFSRKGPSTIQKIKEA
LNFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQA
YQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAA
KASRKKHKRIREDGEEAEGEGEDAEDEEQKGPELKQASRRDMYTICQTAGLDGLAKKFGL
TPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREPL
VRQVLRQTFQERAKLNIAPTKKGKKDVDEAHYAYSCKYLKNKPVKELRDDQFLKICLAEE
EGLLSIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQFL
YVQMAKELKNKLMVEAKEYVIKACSRKLYNWLKVSPYRPDQQVEEDDDFMDENQGKGIRV
LGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEERDKKAQDIETLKKFLL
NKKPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSRKSEN
EFRDYPPVLRQAVSLARRIQDPLIEFSQVCSSDEDILCLKLHPLQEHVVKEELLNALYCE
FINRVNEVGVDVNRAIAHPYSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTMC
HMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAE
DANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTPY
RSPNTEEVFNMLTKETPETFYIGKMITCNVTGIAHRRPQGESYDQAIRNDETGLWQCPFC
QQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGM
TVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDAEAADHKQEEDYKRKQQ
RTTYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQHV
DVREEGKENAFSLGSTLWINTEEFEDLDEIVARYVQPMASFARDLLSHKYYQDCSGGDRK
KLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQIF
PTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTS
QMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPSY
SYTTPSQPITTPQYHQLQASTTPQSTQSQPSSSSRQRQQPKSNSHAAIDWGKMAEQWLQE
KEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggagagcgaggctgaggagtcggaggaggaatacaacgacgatggg
gaggttgttccgagagcaaacaagaagtttgtagaagaggaagatgatgaagaggaggag
gaggagaatcttgatgatcaagatgagcaggggaacctaaagggattcattaatgatgat
gatgacgaggaagaggaggaggaggaagaggcaagcgactctggcgattcggaggatgat
gtcggccacaaaaagagaaaacgcactttcgatgaccgtctggaggatgacgattttgac
ctcattgaagagaacttgggtgtcaaagtcaaaagacaaaaattcaggcgtgtgcgaaaa
atgtcagatgatgaggatgatgaagaggaggattatgggaaggaggaacacgagaaggaa
gcaattgctgaagaaatcttccaggatggggaaggggaagaggggggcgaggctgtcgat
gctcccatagctcctccagaagaggaggaagaggacgaggaagatgaatctgacattgac
gacttcattgtggatgatgatgggcaacctctgaagaagccaaagtggcggaagaagctc
cctggctacacagatgctgctttgcaagaggctcaggagatcttcggagtggactttgac
tatgatgaatttgagaagtacaatgagtatgatgaggagctggaggaggaatatgagtac
gaggatgaggaggccgaaggggagatccgcgtccgacccaaaaagactgccaagaagcgc
gtcagtcgacgaagcatctttgagatgtacgagcccagtgagctggagagcagtcacctg
acagaccaggacaatgagatccgcgtgaccgacatgccagagaggttccagctgcgctcc
atccctgtgaagagtgctgaagatgatgagttggaggaggaagctgactggatctacagg
aatgcctttgccacacctaccatctccctgcaggaaagttctgattacttggaccggggc
caggccagtagcagcttcagccgcaaggggcccagcaccatacagaagattaaagaagcc
ctgaacttcatgaggaatcagcacttcgaggtcccattcatcgccttctaccgaaaggag
tacgtcgagccggagctgcacatcaatgacctctggagggtctggcagtgggatgagaag
tggacccagctgaagatccgcaagcagaacctgacccgtctgtttgagaagatgcaggcc
tatcagtacgagcaaatctctgctgatccggacaaacctttggctgatgggataagggct
cttgataccactgacatggagaggctgaaggacgtgcagtccatggatgagctgaaggac
gtgtataaccatttcttgctgtactacgggcgagacatccccaagatgcagaatgctgcc
aaagccagccgaaagaagcacaagcgaatccgggaggatggggaagaggcggaaggtgaa
ggagaggatgcagaagatgaagagcagaaggggcccgagctgaagcaggcatcccgcagg
gatatgtacaccatctgtcaaaccgctgggctggatggcctggctaagaagtttggtctg
acgcctgagcagtttggagagaatcttcgggacagttaccagcgtcatgagacggagcag
ttcccagcagagccgctggagctggccaaagattacgtgtgtagtcaattcccaacccct
gaggctgtgctggaaggagcccgctacatggtggccttgcagatagcccgagagccactc
gtcaggcaggtcttgagacagactttccaagagagagccaaactcaacattgcaccgacc
aagaagggtaaaaaggacgttgatgaagcccactatgcatattcttgtaagtacctgaag
aacaagcccgtgaaggagctgcgagatgaccagtttctgaaaatctgtctggctgaggag
gaggggctgctgagcatcgacatcagtattgacatgaaaggcgttgagggttatgggagt
gaccagacgtattttgaggaaatcaagcagttctattaccgtgacgagttcagccaccag
gtgcaggagtggaatcgtcagcgcacgatggccatcgagcgttccctcaaccagttcctc
tacgtgcagatggctaaagagctgaagaacaagctgatggtggaggccaaagagtacgtc
attaaggcttgcagccggaagctgtacaactggctaaaggtgtctccctaccggccagac
cagcaggtggaggaagacgatgatttcatggatgaaaatcaggggaagggaattcgggtg
ctgggcattgcattctcctctgccagagaccaccccgtgttctgtgccctggttaatggt
gaaggcgaggttacagacttcctccggctgccgcacttcaccaagagacggaacgcctgg
cgggaggaggagcgggacaagaaggcccaggatatcgaaactctgaaaaaattccttctg
aacaagaagcctcatgtggtgacaattgcaggagagaacagggatgcccagatgttgatg
gaggacgtcaagcggattgtgcatgaactggatcaagggcagcagctgtcttccattggg
gtggagctagtggacaatgagctggccattctctacatgaacagcaggaagtcagagaac
gagttccgggattacccccctgtgctgcgccaagccgtctccctggctcgccgcattcag
gaccccctgatagagttttctcaggtctgcagctctgatgaggatatcctgtgtctgaag
cttcaccctctgcaggaacatgtggtgaaggaggagctgctgaatgccctctactgcgag
ttcataaaccgtgtgaatgaggtgggcgtggacgtcaatcgggcaattgctcacccttac
agccaggccctgctacagtatgtttgtggcctggggccacgcaaagggactcacctgctc
aagatcctgaaacaaaacaacacaaggctggagaaccggacgcagctagtcaccatgtgt
cacatgggacccaaggtcttcatcaattgtgctggtttcatcaaaatcgacactgcatcg
ctgggtgacagcacggattcctacattgaggtcctagatgggtccagagtccaccctgaa
acctatgaatgggcaagaaaaatggcagtggatgccctggagtacgacgaatccgcagag
gatgccaatccagctggagctctagaggagatcctggaaaacccagagcgtctgaaagac
ctggatcttgacgcctttgctgaagagctggagagacagggttacggtgacaaacacatc
actctgtacgacatccgagctgagctgagctgcagatacaaggatctgagaaccccgtac
cgttctcctaacacagaggaggtcttcaatatgctgaccaaagaaacaccagagactttc
tacataggcaaaatgatcacctgcaatgtgactgggatagcccataggaggccccaaggc
gaaagctacgatcaggccatacggaatgacgagactggcctctggcaatgtcccttctgt
cagcaggataacttcccagagctcagcgaggtttggaatcactttgacagtggctcctgc
cctggccaggctattggggtgaagacccggctggacaacggggtcactggctttatacca
accaagtttctcagcgacaaggtggttaagcggccagaagaaagggtgaaggtgggaatg
actgttcactgtaggatcatgaagatagacattgagaagttcagtgcagacctgacctgt
aggacgtcagacttgatggataagaacaatgaatggaagctacccaaagacacttactat
gacttcgatgctgaggcagcagatcacaaacaggaagaagactacaagaggaagcagcaa
cgcacaacatacatcaagagggtgatcgctcacccgtcattccataacatcagcttcaag
caagccgagaagatgatggagaccatggaccaaggggacgtgatcatccggccaagcagc
aagggggagaaccacctgactgtcacctggaaggtgaacgatgggatttaccaacatgtg
gatgtccgagaggagggcaaggagaacgcattcagtttgggctccaccctttggattaac
accgaggaattcgaggacctggatgaaatcgtcgctcgctatgtccagccaatggcgtct
tttgctcgagacctgctaagtcacaaatactaccaagactgcagtggcggagacaggaag
aaactggaagaacttctaataaagaccaagaaagagaagccgacctttattccttacttt
atctgtgcctgtaaagagctacctggcaaattccttctgggataccagcctcgagggaag
ccgaggatagagtatgtgacggtaacaccagagggattccgataccggggacagatcttc
cctaccgtcaacgggctcttccggtggtttaaggatcattatcaggacccagtgccaggt
atcaccccgagcagcagcagcaggacccggaccccagcctccatcaatgctactcccgct
aacattaacctagcggatctgacccgtgccgtgaacgcactgcctcagaacatgacctcg
cagatgttcagtgccatcgccgcggtgacgggccaagggcagaaccccaatgccacgcct
gcacagtgggcatccagccagtacggctatggaggcagcggagggggcagcagtgcatat
catgtctttacaactccagcacagcagccagtggccacccctctgatgacccccagctac
tcctacacgacccccagccagccaattacaacaccgcagtatcatcagctccaggccagt
actacaccccagtccacccagtcgcagccatcatccagttccagacagaggcagcagccg
aagtccaacagccatgctgcaatcgattgggggaaaatggccgagcagtggctacaggag
aaggaggctgagcggaggaaacagaagcagaggctgacccctcgtccatctcccagcccc
atgattgagagcacacccatgtccattgctggggacgccacgccgcttctagatgaaatg
gatcgatag
DBGET
integrated database retrieval system
