Trachemys scripta elegans (red-eared slider): 117867465
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Entry
117867465 CDS
T07347
Symbol
SRSF1
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine-rich splicing factor 1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03040
Spliceosome
tst05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117867465 (SRSF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117867465 (SRSF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tst03041
]
117867465 (SRSF1)
Spliceosome [BR:
tst03041
]
Common components
Common spliceosomal components
SR proteins
117867465 (SRSF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
117867465
NCBI-ProteinID:
XP_034608412
LinkDB
All DBs
Position
18:8154964..8159080
Genome browser
AA seq
249 aa
AA seq
DB search
MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSE
YRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKF
RSHEGETAYIRVKVDGPRSPSYGRSRSRSVVVAEAVVEATAEAAVIPQEEAEDLHATLPV
TADLVLVHK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagggggcgtgatccgcggcccagccggtaacaacgactgccgcatctacgtg
gggaacctgccgcccgacatccgcaccaaggacatcgaggacgtgttctacaagtacggg
gccatccgcgacatcgacctcaagaaccgccgcggcgggccgcccttcgccttcgtggag
ttcgaggaccccagggatgcggaggatgcggtgtacggaagggatgggtacgattacgat
ggatatcgtctgagggtggagtttccccgaagcggcagaggcaccggcagaggaggtggc
ggaggtggaggtggcggggcccccaggggcaggtatggccccccgtcccggcggtctgag
taccgagtgatagtttccggactgcctccaagtggaagttggcaggatttaaaggatcac
atgcgtgaagcaggtgatgtatgttatgctgatgttttccgagatggaactggtgtcgtg
gagtttgtacggaaagaagatatgacctacgcagtgcgaaaactggataacactaaattt
agatctcatgagggagaaactgcctacatccgtgttaaagttgatggcccaagaagtcca
agctatggaagatctcggtcacgcagcgtagtcgtagcagaagccgtagtcgaagcaaca
gcagaagccgcagttattccccaagaagaagcagaggatctccacgctactctccccgtc
acagcagatctcgttctcgtacataaatga
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integrated database retrieval system
