Trachemys scripta elegans (red-eared slider): 117867527
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Entry
117867527 CDS
T07347
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03030
DNA replication
tst03410
Base excision repair
tst03420
Nucleotide excision repair
tst03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117867527 (RFC2)
03410 Base excision repair
117867527 (RFC2)
03420 Nucleotide excision repair
117867527 (RFC2)
03430 Mismatch repair
117867527 (RFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tst03032
]
117867527 (RFC2)
03036 Chromosome and associated proteins [BR:
tst03036
]
117867527 (RFC2)
03400 DNA repair and recombination proteins [BR:
tst03400
]
117867527 (RFC2)
DNA replication proteins [BR:
tst03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117867527 (RFC2)
DNA Replication Termination Factors
ELG1-RFC complex
117867527 (RFC2)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
117867527 (RFC2)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117867527 (RFC2)
Check point factors
HRAD17(Rad24)-RFC complex
117867527 (RFC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
RCF1-5-like_lid
AAA_14
AAA_16
Viral_helicase1
Mg_chelatase
AAA_24
AAA_11
Rad17
DNAX_ATPase_lid
AAA_assoc_2
RuvB_N
AAA_19
nSTAND3
MipZ
AAA_18
Gp44_lid
AAA_5
AAA_28
ABC_tran
AAA_25
AAA_30
AAA_23
NTPase_1
MeaB
RNA_helicase
SLFN-g3_helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
117867527
NCBI-ProteinID:
XP_034608550
LinkDB
All DBs
Position
18:16423240..16433396
Genome browser
AA seq
353 aa
AA seq
DB search
MEVEMAEAERPGPRDGEKRGAADAPAASGSGHYELPWVEKYRPMKLSEIVGNEDTVSRLE
VFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIK
MFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPI
QSRCAVLRYTKLTDAQILARLMKIVERENVQYTDDGLEAIIFTAQGDMRQALNNLQSTYS
GFGFINSENVFKVCDEPHPLLVKEMIQHCVNANIDEAYKILAHLWRLGYSPEDIVGNIFR
VCKTFQMPEYLKLEFIKEIGYTHMKVAEGVNSLLQMAGLLARLCQKTAAPAES
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggagatggcggaggccgagaggcctgggccgcgggacggggagaagcgggga
gcggccgacgcccctgcggcctccggcagcggccactacgagctgccctgggttgaaaaa
tacagacctatgaagctatctgaaatagttgggaatgaagacactgtgagcagactggag
gtttttgcaagggagggaaatgtaccaaatattataattgctggtcctccaggaactggt
aaaacaaccagtatcttatgtttggctcgtgcactgcttggtcctgcattaaaggatgct
gttctggaactgaatgcttcaaatgacaggggcattgatgttgtgagaaacaaaatcaaa
atgtttgctcagcagaaggtcacacttcccaaaggtcggcataagataatcatcctggat
gaagcagacagcatgaccgatggagcacagcaagcattgcgaagaacaatggaaatttat
tccaaaacaactcgctttgcacttgcatgcaatgcctcagataaaatcatagagccaatc
cagtctcgctgtgctgtgctgcgttacaccaagctgacagatgctcagatccttgcaagg
ttaatgaaaattgttgagagagagaatgtacaatacacagatgatggactggaagccatt
atcttcacagcacaaggagatatgagacaggcattaaacaacttgcagtccacatattct
ggatttggctttattaacagtgagaatgtatttaaggtgtgtgatgagccacaccctctg
ctagtgaaggaaatgatacagcactgtgtgaatgcaaatattgatgaagcatacaagatt
cttgcccacttgtggcggcttgggtactcaccagaagatatagttggcaatatcttcaga
gtgtgtaaaaccttccaaatgccggagtatctgaaattggagttcatcaaggaaattgga
tatactcacatgaaggtagcagaaggggtgaattctctcttgcagatggctggactgctt
gccaggctctgtcagaagacggctgctcctgcagaaagttaa
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