Trachemys scripta elegans (red-eared slider): 117867531
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Entry
117867531 CDS
T07347
Symbol
HNF1B
Name
(RefSeq) hepatocyte nuclear factor 1-beta isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117867531 (HNF1B)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
117867531 (HNF1B)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
APP1_cat
Motif
Other DBs
NCBI-GeneID:
117867531
NCBI-ProteinID:
XP_034608558
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Position
18:complement(7921720..7982866)
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AA seq
558 aa
AA seq
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MVSKLSSLQQELLSALLSSGVTKEVLIQALEDMVPTTSFGVKLENLPLSPGSGTEADSKP
VFHTLTNGHSKGKLSGDEGSEDGDDFDTPQILRELQALNTEEAVEQRAEVDRMISEDPWR
AAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREIL
RQFNQTVQGSGNMTDKSSQDQLLFLFPEFNQQNQGTGQLEDTCSETPSKKMRRNRFKWGP
ASQQILYQAYDRQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLVTEVRVYNWF
ANRRKEEAFRQKLAMDAYSTGQPHSMNLLLSHNSPHHAQPSSSPPSKMAGVRYSQQGNNE
VTSSSTISHHGNNTMVTTSQSVLQQVSPAGLDPGHNLLSPDGKMISVSGGGLPPVSTLTN
IHSLPHHNPQQSQNLIMTPLSGVMAIAQSLNTSQAQSVPVINSVAGSLAALQPVQFSQQL
HSPHQQPLMQQSPSHMTQQPFMATVTQLQNSHMYAHKQEPPQYSHTSRFPSAMVVTDTSS
ISTLTNMSSNKQCPLQAW
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccaagctcagctctctgcagcaggaacttctgagcgctctcctcagctccggt
gtcaccaaggaggtgttgatccaagccctggaggacatggtgcccaccaccagcttcggg
gtgaagctggagaacctgcccctgtccccaggcagcgggacagaggcggacagcaagccc
gtcttccacaccctcaccaacggccacagcaagggcaaactgtccggggacgagggctcc
gaggacggggacgacttcgacaccccgcagatcctccgggagctgcaggcgctcaacacg
gaggaggccgtggagcaaagggcggaggtggatcggatgatcagcgaggacccctggcgg
gctgcaaaaatgatcaaaggttacatgcagcagcacaacatcccccagagggaggtggtg
gatgtcacaggcctgaatcagtctcacctctcccagcacctcaacaagggaacacccatg
aaaacacagaagcgggcagcactctacacgtggtacgtccggaagcagagggagattctc
agacaattcaaccagacagtccagggttctggaaatatgacagacaaaagcagtcaggat
cagctgctgtttctctttccagagttcaatcagcagaaccagggcacgggccagctcgag
gacacctgctctgaaacccccagcaagaagatgcgacggaatcgattcaaatgggggcct
gcctcgcaacaaatcttgtaccaagcctacgaccggcaaaagaaccctagcaaggaggaa
agggaagccttagtggaggaatgtaacagggcggaatgtctccagcgaggcgtgtccccc
tccaaagcgcatgggctgggctccaacctggtgacggaagtgcgtgtctacaactggttc
gcgaaccgacggaaagaggaggctttccgccagaaactggccatggacgcctacagcaca
ggccagccgcacagcatgaacctcctgctgtcccacaactcgccccatcacgcccagcct
agctcgtcgccccccagcaaaatggcaggcgtccgatacagccagcaggggaacaatgag
gtcacttcctcttcgacaatcagtcaccatggcaacaacaccatggtgaccaccagccag
tccgtcctacagcaggtttctccagcagggttggacccaggccacaatttactctcgcct
gatggtaaaatgatctctgtttcgggaggtgggctgccccctgtaagtaccctgaccaat
atccacagcttgccccatcacaacccacaacagtctcagaacctcatcatgacaccgctc
tctggcgtcatggcaatcgcgcaaagtctaaatacttcccaggcgcagagcgtccctgtt
atcaacagtgttgccggaagtctggcagctttacaaccagttcagttttcccagcagcta
cacagtcctcatcaacagccactcatgcaacagtcgcccagccatatgacacagcagcct
tttatggccacagtgactcagctgcagaattcacacatgtatgcacacaagcaggagcct
ccccagtattcccacacttcccggtttccatcagccatggtggtcacagataccagcagc
atcagtacattaaccaatatgtcttccaataaacagtgtcccctgcaagcctggtga
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