Trachemys scripta elegans (red-eared slider): 117867534
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Entry
117867534 CDS
T07347
Symbol
STX1A
Name
(RefSeq) syntaxin-1A isoform X1
KO
K04560
syntaxin 1A
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117867534 (STX1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117867534 (STX1A)
Membrane trafficking [BR:
tst04131
]
SNARE
Syntaxin (Qa)
Stx-PM
117867534 (STX1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
Syntaxin_2
Spectrin_Anc-1
PspA_IM30
ATG17_like
Laminin_II
FapA
Lzipper-MIP1
YtxH
Ferritin
Lipoprotein_2
DUF5856
CC4_CEP85
ISG65-75
ANIS5_cation-bd
STX6_10_61_N
Translin
Motif
Other DBs
NCBI-GeneID:
117867534
NCBI-ProteinID:
XP_034608564
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All DBs
Position
18:complement(22111554..22397636)
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AA seq
258 aa
AA seq
DB search
MCRASFPAPRSPPEPGRQRRAERVPGGASMKDRTGELRAAKDSDDDDEVTVSVDRDRFMD
EFFEQVEEIRGFIDKISENVEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTANKVRS
KLKSIEQSIEQEEGLNRSSADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRERCKGRIQR
QLEITGRTTTSEELEDMLESGNPAIFSSGIIMDSNITKQALNEIETRHSEIIKLETSIRE
LHDMFMDMAMLVESQGEQ
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtgccgcgcctccttccccgccccccgatcgccgccggagccggggaggcagcgccga
gccgagcgggtgccgggcggagcgagcatgaaggaccgaacgggggagctccgcgcggct
aaggacagcgatgatgatgatgaagtcaccgttagcgtggaccgggatcgcttcatggat
gagttctttgaacaggtggaagaaattcgagggttcatcgataaaatttctgagaatgtg
gaggaagtgaagaggaagcacagtgctattcttgcatcccccaacccagatgagaaaaca
aaggaggagctcgaagaattaatgtctgacatcaaaaagacagcaaacaaagtgcgctcc
aagttaaagagtattgaacagagtattgaacaagaggaaggattgaatagatcatctgct
gacctgaggataaggaaaacgcagcattccacattgtcgcgcaagtttgtggaggtgatg
tctgagtacaacgccacccagtctgactacagggagcgctgcaaagggaggattcaaaga
cagctggaaatcactggcaggaccacaaccagcgaggagctggaagacatgctggagagc
gggaatccagccatcttctcctctgggatcatcatggattccaacatcaccaagcaggcg
ctgaacgagatcgagacgcggcacagcgagatcatcaagctggagaccagcatccgggag
ctgcacgacatgttcatggacatggccatgctggtggagagccagggggagcagtga
DBGET
integrated database retrieval system
