KEGG   Trachemys scripta elegans (red-eared slider): 117867579
Entry
117867579         CDS       T07347                                 
Symbol
NLE1
Name
(RefSeq) notchless protein homolog 1
  KO
K14855  ribosome assembly protein 4
Organism
tst  Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:tst00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tst03009]
    117867579 (NLE1)
Ribosome biogenesis [BR:tst03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    117867579 (NLE1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WD40_MABP1-WDR62_2nd WDR55 ANAPC4_WD40 Beta-prop_Aladin Beta-prop_WDR75_1st DSE1_N Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_WDR19_1st ASA1 NBCH_WD40 Beta-prop_WDR41 NLE WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_RIG_2nd CFAP251_N Beta-prop_VPS8 Beta-prop_EIPR1 Beta-prop_DCAF12 PAC11 Beta-prop_DCAF4 Beta-prop_NOL10_N Tricorn_2nd Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 Beta-prop_HPS5 WD40_RFWD3 eIF2A TRM82_WD Beta-prop_SPT8 RMC1_N WDR54 Ge1_WD40 Beta-prop_WDR75_2nd PD40 Cytochrom_D1 FAD_binding_9
Other DBs
NCBI-GeneID: 117867579
NCBI-ProteinID: XP_034608649
LinkDB
Position
18:3847466..3861759
AA seq 485 aa
MAGAAQVATMQGDVERLLILFKDEAGEILGSPFDVPVDITPEKLQLVCNALLQKEEPLPL
AFYVHDAEIVTSLEKTLAGQVVETERVLDIIYQPQAVFKVRAVTRCTSSLEGHTEAVISV
AFSPTGKYLASGSGDTTVRFWDLSTETPHFTAKGHRHWVLSIAWSPDGRKLASGCKNSQI
FLWDPDTGNQIGRVLAGHSKWITWLCWEPLHINPECRYLASASKDCSIRIWDTVTGRCDK
ILTGHTQSVTCVKWGGDGLLFSSSQDRTIKVWRGQDGILCRTLQGHGHWVNTMALSTDYV
LRTGAFEPAEASVNPQDMSGTLAELKEKAQHRYDQVRGQGPERLVSGSDDFTLFLWAPAE
DKKALERMTGHQALINQVLFSPDTRIIASASFDKSIKLWDGRTGKYLTSLRGHVSAVYQI
AWSADSRLLISGSSDSTLKVWDAKTGKLAIDLPGHADEVFAVDWSPDGQRVASGGKDKCL
RIWRR
NT seq 1458 nt   +upstreamnt  +downstreamnt
atggctggggctgcccaggtcgccacgatgcaaggggatgtggagaggctgctgatcctg
ttcaaagatgaggctggcgagatcctggggtccccctttgacgtgcccgttgatatcacg
ccggagaagctgcagctggtctgcaacgcgttgctccagaaggaggagccgctgcccttg
gccttctacgtccacgatgctgaaatcgtcacgtcgctggagaagaccctggcggggcag
gtggtggagacggagagagtcctcgacatcatctaccagccccaggctgtattcaaagtg
cgggcggtgacgcgatgcaccagctctttggaggggcacaccgaggctgtcatctccgta
gccttcagccccactggaaagtacctggcgagcggctccggtgacaccaccgtgcgcttc
tgggacctcagcacggagacgccacacttcacggccaaaggtcacaggcattgggtcctc
agcatcgcctggtctcccgatggcaggaagctcgcctcagggtgcaaaaacagtcagata
tttctctgggacccagacacagggaatcagattggcagggtgctcgccggacactccaaa
tggatcacgtggctgtgttgggaaccactccacataaatcccgagtgccgctacttggcc
agcgcctccaaggactgcagcatccgcatctgggacaccgtcacgggccggtgcgataag
atcctcaccgggcacacgcagtcggtcacgtgcgtgaagtggggcggagatggcctgctc
ttctcctcctcccaggacagaaccatcaaggtctggagaggccaggatggaattctctgc
cgcaccctgcagggccacgggcactgggtgaacaccatggctctgagtaccgactacgtt
ctccgcacaggggcctttgaacccgccgaagcctctgtcaacccacaagacatgagtggc
accctggcagaactgaaagagaaggcgcagcacaggtacgaccaagtcagggggcaggga
ccggaaaggctagtgtctggatcggatgacttcacgctgttcctgtgggccccagcagag
gacaagaaggcgctggagagaatgacaggccaccaggcattgatcaaccaagtgctcttc
tccccagacacccggataatagccagtgcttcctttgacaagtccatcaagctctgggat
ggcaggacgggaaaatacctcacctccctgagagggcacgtctctgctgtttaccagatc
gcctggtctgcagacagccgcctcctgataagcgggagcagtgacagcacgctgaaggtg
tgggacgccaagacggggaagctggccatcgatctccccggccatgcagacgaggtgttt
gcagtggattggagcccggatggacagcgagtagccagcggagggaaagataagtgttta
aggatatggagacgatag

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