Trachemys scripta elegans (red-eared slider): 117867658
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Entry
117867658 CDS
T07347
Symbol
NSUN5
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tst03009
]
117867658 (NSUN5)
Enzymes [BR:
tst01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
117867658 (NSUN5)
Ribosome biogenesis [BR:
tst03009
]
Eukaryotic type
Other ribosome biogenesis factors
117867658 (NSUN5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NSUN5_fdxn-like
NSUN5_N
Methyltr_RsmB-F
FtsJ
Fibrillarin
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
117867658
NCBI-ProteinID:
XP_034608755
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Position
18:complement(24766836..24772191)
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AA seq
512 aa
AA seq
DB search
MSSPVTPLSRVSRGRGLAERLCRKSGALAVARGSHCRVRGPGRAMALYTAAASVLDGLQR
RDGALKTLVYKSRFQNVKQLYALVSETLRYSPVLDSIMDGAALLKAEKKLPPHLAKVLVY
DLLFGKGLKCGGSWKVLVLKHRARLQAELARLKVRRKVSCNEDLLAPTEGVIQALQVPRY
VRVNTLKTCKDDVVDYFKRQGYSYLGRAARMEELSSLSGKQFLLDPHLPELLVFPPQTDF
HENRLYVAGHIILQDKASCLPAFLLSPPSGSHVIDACAAPGNKTSHVAAILKNKGQIFAF
DLDPNRLATMSTMLVRAGVSCCELANQDFLTVDPSDPKYSNVTYILLDPSCSGSGMVNRL
PAEESAPSSERLRALARFQRKALSHALRFPALQRLAYSTCSVQQEENEDVVWDVLQEHGT
AFRLVNVLPSWPHRGLATFPGAECCLRACPAATLTNGFFVAVLERQQECTSQGSSSSLPA
AVDGGAERSQDGEGRGPRAARKKRRKKSQCVK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgccggtcacgcccctgtcgcgcgtttcgcgggggcggggcctcgcggagcgg
ctgtgccggaagtcgggcgcgctggctgtggcgcgcgggtcgcactgccgggtacggggg
ccgggacgggccatggcgctctacaccgcggccgcctctgtcctggacgggctgcagcgc
cgggacggcgccctcaagactctggtgtacaagagccgcttccagaacgtgaagcagctc
tatgctctggtgtcagagaccctgcgctactcacccgtgctggactccatcatggacggg
gctgccttgctgaaggctgagaagaagctgcccccacacctggccaaggtgctggtgtac
gacctgctctttggcaagggtctgaagtgcgggggcagctggaaggtgctggtgttgaag
caccgggcccggctgcaggcagagcttgcccgtctcaaggtgcgcaggaaggtgagctgc
aacgaggatctgctggctcccacagagggggtgatccaagcccttcaagtgccacgttat
gtccgagtgaacaccctgaaaacttgcaaggatgatgtggtcgactacttcaaacgccag
ggctactcctacctgggcagggcagccagaatggaggagctgagctccctctcagggaag
caattcctcttggatccccacctgccggagctgcttgtcttcccgccgcagacagacttc
catgagaaccggctgtacgtcgcagggcatatcatactgcaggacaaggccagctgcctt
cctgccttccttctgagtcccccctcgggctcccatgtaatcgatgcctgcgctgccccc
gggaacaagaccagccatgtggctgccatcctgaagaacaaggggcagatcttcgccttt
gacctggaccccaaccgcttggccaccatgagcaccatgctggtgcgggctggggttagc
tgctgtgaactggccaatcaggacttcctgacagttgaccccagtgacccaaagtacagc
aatgtgacctacatcctcctggacccctcatgcagcggctcaggaatggtgaaccggctg
ccagctgaggagagtgcccccagctcggagcggctgcgggcgctggctaggttccagcgc
aaggccctgagccatgctctgcgcttccctgccctccagcgcctggcttactccacgtgc
tcggtgcagcaggaggagaacgaggacgtggtgtgggatgtgctccaggagcacggcaca
gcgttcaggttggtaaatgtactgccttcctggccccatcgaggcctcgccaccttccca
ggtgcagagtgctgcctccgagcctgccctgcagcgacgctgaccaacggcttctttgtt
gccgtcctggagaggcagcaggaatgcaccagccagggctcctccagctcccttcctgct
gcggtggacggtggagcagagagatcccaggatggagagggaaggggccctcgcgctgcc
cgcaagaagaggcggaagaagagccagtgtgtgaaataa
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