Trachemys scripta elegans (red-eared slider): 117867777
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Entry
117867777 CDS
T07347
Symbol
USP48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tst01002
]
117867777 (USP48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117867777 (USP48)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117867777 (USP48)
Peptidases and inhibitors [BR:
tst01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117867777 (USP48)
Ubiquitin system [BR:
tst04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117867777 (USP48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
117867777
NCBI-ProteinID:
XP_034608925
LinkDB
All DBs
Position
19:21499859..21550226
Genome browser
AA seq
1036 aa
AA seq
DB search
MAPRLQLEKAAWRWTESVPPEEVTQEHIEAAYRIGLEPCQRGVCRRNCRGNPNCLVGIGE
HVWLGEIDENSFHNIDDPNSERRKKNAFVGLTNLGATCYVNTFLQMWFLNLELRQALYLC
PSTCSEYVTGQGIPKDRDYEPQTICEHLQYLFALLQNSNRRYIDPSGFVKALGLDTGQQQ
DAQEFSKLFMSLLEDTLSKQKNPDVRNIVQKQFCGEYAYVTVCNQCGRESKLISKFYELE
LNIQGHKQLTDCITEFLKEEKLEGDNRYFCETCQSKQNATRKIRLLSLPCTLNLQLMRFV
FDRQTGHKKKLNTYIGFSELLDMEPFMEQKDGVYIYELSAVLIHRGVSAYSGHYIAHVKD
PQTGEWYKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQTRKPKCGKGTHCSRNAYMLVYRL
QTREKSLTAEIPTFLQELVERDNCKFEEWCNEMADMRKQSVVRGKIKHEEVKELYQRLPA
EAGCPYEFVSLEWLQKWLDESAPPKPIDNTACLCSHGKLHPDKISIMKRISEYVADYFYR
RYGGGPRLNVKALCKDCVVERCRILRLKNQLNEDYKTVTNLLKITVKGNDGFWVGKSSLR
SWRQLALEQLNEQDDDADQNNGKMNGDAQNKDESNEEKREEEEELNFNEDLVCPHGDLCI
SENERRVVSKEAWKKLKQYFPKAPEFPNSKECCSQCKILEREGEENEALHKMMASEQKTA
LQNLFQDKSRPCLGSWPQETDELYIVSQFFVEEWRKFVRRPTRCSPVSSVGNSALLCPHG
GLMFTFASMTKEDSKLIALIWPSEWEAIQKLFVVDHVIKILRMQTAETSPESTLFDSEPK
LCPECREGLLCQQQRDLREYTQATIYVHKVVDNKKVMKEAAPELNVSSSEAEEEREEAKP
EGEQDPDFNQTNGGAKRQKISHQNYIVYQKQGIRRSTRHRKVRGEKALLVSANQTLKELK
IQIMHAFSVAPFDQNLSIDGKILNDDTATLGALGVIPESVILLKADEPIADYAAMDDVMQ
VCMPEEGFKGTGLLGH
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggccccgcggctgcagctggagaaggcggcctggcgctggaccgagagcgtgccgccc
gaggaggtgacgcaggagcatatcgaggcggcctatcgcattgggctggagccctgccag
cgcggcgtgtgcagaagaaactgcagaggaaacccaaactgtttggttgggattggtgaa
catgtttggctaggagaaattgatgaaaatagctttcacaacattgatgacccaaactct
gaacggaggaaaaagaacgcctttgtaggcctaacaaaccttggagccacatgctacgtg
aacactttcttgcagatgtggtttcttaacttggaacttcggcaggccctttacttgtgt
ccaagcacctgcagtgaatatgtgactggtcaaggcatcccaaaagacagagattatgaa
ccccagacaatttgtgaacatcttcagtacttgtttgcgttgttacagaacagtaataga
cgatacattgatccctccgggtttgttaaagcactaggtttggatacaggacaacaacag
gatgcccaggaattttcaaagctattcatgtcactactagaggatactttgtctaaacaa
aaaaatccagatgtacggaacattgttcaaaagcagttttgtggagagtatgcatatgtc
actgtctgtaaccagtgtggcagggagtccaaactcatatcgaaattttatgaactggag
ttaaatatccaagggcacaagcagttgacagactgtatcacagaatttcttaaggaagaa
aagttagaaggggacaatcgttacttttgtgaaacttgtcagagtaaacaaaatgcaaca
aggaagatcaggctgcttagtcttccatgtacactcaacttgcagctgatgcgttttgtg
tttgacagacaaactggccataagaaaaagttgaatacttacattggcttttctgaattg
cttgatatggaaccttttatggaacaaaaagatggtgtctatatatatgaacttagtgca
gttcttatacacaggggagtgagtgcatactctggtcactacattgctcatgtgaaagac
ccacagactggtgaatggtacaagtttaatgatgaagacatagaaaagatggaggggaag
aaattgcaactagggattgaggaagatctagcagagccttctaagtctcagactcgtaaa
cccaagtgtgggaaaggaactcactgctctcgaaatgcttacatgttggtgtatcgactg
caaacacgggaaaaatctctaacagcagaaatcccaacttttctgcaggagctcgtcgaa
cgggataactgcaagtttgaagagtggtgtaacgaaatggcagatatgcgtaaacaaagc
gtggtcagaggcaaaatcaaacatgaagaggtgaaggagctctaccaaaggttgcctgct
gaagctggatgcccgtatgagtttgtctctcttgaatggttacagaaatggctggatgaa
tctgcccctcccaaacccatagataacactgcatgcttgtgttcacatggcaaattgcac
cctgataaaatatcaattatgaagagaatatctgagtatgttgctgactacttctacagg
agatacggaggggggcccaggctaaatgttaaagcactttgcaaggactgtgtggtagag
agatgtcgaatactacgactgaaaaaccaattaaatgaagactataaaactgtcacaaac
ttgctgaaaattacagtaaagggtaatgatggattttgggttggaaagtcatccttgcgg
agttggcgtcagctggctctggaacagttaaatgaacaagatgatgatgcagaccagaat
aatggaaaaatgaatggagatgcacaaaacaaagatgagtccaatgaagaaaagagggag
gaggaagaggagttaaattttaatgaagaccttgtttgcccacatggtgacctatgcata
tcagaaaatgaaaggagggttgtttctaaagaagcctggaaaaagctcaagcagtatttt
ccaaaggccccagaatttccaaatagcaaagaatgctgttcccagtgcaagattctggaa
agagaaggagaggaaaatgaagccctgcataagatgatggcaagtgagcagaagactgct
ctgcagaacctgttccaagacaaatccagaccatgtcttggtagctggcctcaggagaca
gatgagctctacattgtatcacagttttttgtagaagaatggaggaaatttgtaaggagg
cctacaagatgcagtcctgtatcatcagtaggaaacagtgctcttctctgcccacatggg
ggcctcatgttcacatttgcttccatgaccaaagaagactctaaacttatagctctaata
tggcccagtgagtgggaggcaatacaaaaactgtttgttgtggatcacgttatcaaaatc
ctcagaatgcaaactgctgagacgagccctgagagcacgcttttcgattctgagcccaag
ctgtgtccagaatgcagagaaggattgttgtgccagcagcagagggacctgcgtgagtac
acccaggccaccatctatgtacataaagtggtggataataaaaaggtaatgaaggaagct
gctccagaactgaatgtgagcagttcagaagctgaagaggaaagggaggaagccaaacca
gaaggggaacaggatccagattttaatcagactaatggtggtgcgaaacgacagaagata
tcccaccagaactacattgtttatcaaaagcaaggcatcagacggagcacgcgacacaga
aaagtcagaggggaaaaggcactacttgtttctgccaaccagacattgaaagagctgaaa
atacagatcatgcacgcattttcagttgctccgtttgaccagaatttgtcaatcgatggg
aagatactaaatgatgacactgcaacacttggcgcccttggagtcattccagagtcagtc
attttattgaaggctgatgaaccaattgcagattatgcagcaatggatgatgttatgcaa
gtttgtatgcctgaagaaggatttaaagggactggtcttcttggacactaa
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integrated database retrieval system
