Trachemys scripta elegans (red-eared slider): 117867811
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Entry
117867811 CDS
T07347
Symbol
DSCAM
Name
(RefSeq) Down syndrome cell adhesion molecule isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tst04515
]
117867811 (DSCAM)
Cell adhesion molecules [BR:
tst04515
]
Immunoglobulin superfamily
Other
117867811 (DSCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
FN3_DSCAM-DSCAML_C
V-set
Ig_5
C2-set_2
Pur_ac_phosph_N
Ig_4
V-set_CD47
C1-set
Sp38
Interfer-bind
Ig_C17orf99
Ig_RIMBP2
fn3_2
C2-set_3
ChitinaseA_N
Fn3_VIN3
Adeno_E3_CR1
DUF6377
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
117867811
NCBI-ProteinID:
XP_034609014
LinkDB
All DBs
Position
1:complement(190209559..190822575)
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AA seq
2008 aa
AA seq
DB search
MWILAIFLFQSILNVFSEDLHASLYFVNASLQEVVFASTTGTLVPCPAAGIPPVTLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFNNLIHDNTYYCTAENPSGKIRSQDVHIKA
VLREPYTVRVEDQKAMRGNVAVFKCIIPSSVEAYITVVSWEKDTVSLVSGSRFLITSTGA
LYIVDVQNEDGLYNYRCITRHRYTGETRQSNSARLFVSDPANSAPSILDGFDQRKAMAGQ
RVELPCKASGHPAPKYRWLKDNVPWEPDSRFRQTVTGLLIENTRPSDSGNYVCEVWNNYG
TAEVIGHLHVKQPLKATISPRKVKSSVGSQVSLSCSVTGTEDQELSWYRNGEIINPGNNV
RIMGINHENLIMDGMAKSDGGAYQCFVRKDKMSAQDYVQVVLEDGTPKIISAFSEKVVSP
GEPVSLMCNVKGTPLPTITWTLDEDPIIKDGNHRISQIITSEGNVVSYLNISNTQVRDGG
VYRCTANNSAGVILYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKN
SDLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQ
PFEFPRFSIGQRVFVPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRIFNLS
LMHNGNYTCIARNDAAAVERQSQLIVRVPPRFVVQPSDQDGIYGKAVILNCSAEGYPVPT
IVWKYSKGAGVPQFQPIALNGRIQLLTNGSLLIKHVLEEDSGYYLCKVSNDVGADVSKSM
YLTVKIPAMITSYPNTTLATQGQKKEMSCTAHGEKPIIVRWEKEDRIINPEMSRYLVSTK
EVGDEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIREVRARS
IALRWTMGFDGNSPITGYDIECKNKSDSWDSVQRTKDVSPQLNQATIIDLHPSSTYNIRM
YAKNRIGKSEASNELTITTDEAAPDGPPQEVQLEPVSSQSIRVTWKAPKKHLQNGIIRGY
QIGYREYSAGGNFQFNIISIDTTGDSEVYTLDNLKKFTQYGMVVQACNRAGIGPSSQEII
TTTLEDVPSCPPGNVQATATSPETISISWSTLPKEALNGILQGFRVIYWANLLDGELGEI
KNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAA
SPSTVFVSWLPPFKLNGVIRKYTVFCSHPYPTVISEFEASPDSFSYRIPNLSRNRQYSVW
VVAVTAAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPSPTVKWM
KDSNGTPSLVMIDGRRSIFSNGSFVIRTVKAEDSGYYSCVASNNWGSDEIILNLQVQVPP
DQPRLTVSKTTSSSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLET
LKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWN
DGGCPITSFTLEYRPFRTTVWTTAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQ
AKFATLNYDGSTIPPLIKSVVQSEEGLATNEGLKMLVTISCILVGVLLLFVLLLIVRRRR
REQRLKRLRDAKSLAEMLMSKNTRTSDTLNKQQQTLRMHIDIPRAQLLIEERDTMETIDD
RSTVLLTDADFGETSKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTRRNAKTGP
TARNRYASQWTLNRPHPTISAHTLTTDWRLPTPRAAGSVDKESDSYSVSPSQDTDRARSS
MVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNEYTDSLTS
STPSESGICRFTASPPKPQDGGRVMNMAVPKAHRPGDLMHLPPYLRMDFLLNRGVSGTSR
DLGLGQACLEPQKSRTLKRPTVLEPIPMETSSTREVQSWQPGAVATLPQREGAELGQAAK
MSSSQESLLDSRGHLKGNNPYAKSYTLV
NT seq
6027 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggctatcttcttgttccagagcatcttgaatgttttcagtgaagatcta
catgccagcctgtattttgtcaatgcatctttgcaagaggtagtgtttgctagcaccacg
gggacactggtgccctgtcctgcagcagggatccctcctgtgacactcagatggtaccta
gcaacgggcgaggagatctatgatgtcccagggatccgccacgtccaccccaatggcact
ctccaaattttccccttccctccttcaagctttaataacctaatccatgataacacttac
tattgcacagctgaaaatccttcagggaaaatcagaagtcaggatgttcacattaaggcc
gttttacgggaaccctacacagtccgtgtggaggaccagaaagccatgagaggcaatgta
gcggtcttcaagtgcattatcccctcctctgtggaggcatacatcactgttgtctcttgg
gagaaagacacagtctcacttgtctcaggatctagatttctcatcacatccacgggagcc
ttgtatattgtagatgtacagaatgaagatggattgtataactaccgatgtatcacacgg
cacagatacactggagaaacaagacaaagcaacagcgcaagactttttgtatcagaccca
gcaaactcagcaccgtctattctggatgggtttgaccaacgtaaagccatggcaggacag
cgagtggagctgccttgcaaagcatcggggcacccagcaccaaagtaccgttggctgaag
gacaatgttccctgggagccagatagcaggtttcggcagacagtcacaggtctgctgata
gagaacacacgtccttcggactcaggcaactacgtttgtgaggtgtggaacaactatggt
actgctgaggtgatagggcatctacatgtaaaacagcctctgaaagccacaatcagtcca
cggaaagttaaaagcagtgttggtagtcaagtgtccttgtcctgcagtgtgactggaact
gaggaccaagaactctcctggtaccgaaatggtgaaatcatcaaccctggaaataatgtg
aggatcatggggatcaaccatgagaatctcattatggatggcatggccaaaagtgatggt
ggagcgtaccagtgctttgtacgcaaggacaagatgtctgctcaagactatgttcaggtg
gtgctagaagatggaactcccaaaatcatttctgccttcagtgagaaagtggtgagtcca
ggagaacctgtctcccttatgtgcaatgtgaaggggactcctctgcctacaatcacctgg
acactagatgaagaccccataatcaaagatggtaatcaccgtatcagccagattatcacc
tctgagggcaatgtggtcagctacctgaatatctctaacactcaagttcgagatggggga
gtctatcgctgtactgccaacaactctgctggagtcatcctgtaccaggctcgaataaac
gtaagagggccagcaagcatccgtccaatgaaaaatatcacagcaatagcaggacgggac
acctatatacattgccgtgtgattggctatccatattactccattaaatggtacaagaac
tctgacctgcttccttttaaccatcgccaagtagcattcgaaaacaatggaacgctgaaa
ctctcagatgtgcagaaggaagtggatgagggggaatatacatgcaatgttctggttcaa
ccccagctgtctacaagccagagtgtacatgtgactgtaaaagttccacctttcatccag
ccttttgagtttccaaggttctccattggacagcgagtcttcgttccatgtgttgtggtc
tcaggggatttgccaatcacaatcacctggcagaaggatggcaggccaatcccagccagt
cttggagtaactattgacaacattgacttcaccagctccttaaggatttttaatctttca
ctgatgcacaatgggaattatacctgtatagctagaaatgacgctgcagctgtggagcgc
caaagccaattaattgtgagagttccccctagatttgtggttcaaccaagtgatcaagat
gggatttatggtaaagctgtaatcctcaattgttctgcagagggttatcctgtacccacc
attgtctggaagtactcaaaaggtgctggggtcccccagttccagcccattgccttgaat
ggccgtatccaacttctcacaaatggctccttgttgattaaacatgtgctggaggaagac
agtggatactacctctgcaaggtcagcaatgatgtgggcgcagacgtcagcaagtccatg
tacctcactgttaaaattcctgctatgatcacttcctatccaaacaccactttggcaaca
cagggtcaaaagaaggagatgagctgcacagcacatggagagaaacccatcatagtccgc
tgggagaaagaggatcgaatcattaaccctgaaatgtcccgctatcttgtttccaccaag
gaagtgggtgatgaagtcatctctaccctgcagattttgccaactgtgcgtgaagattct
ggtttcttttcctgccacgctatcaattcttacggggaggaccgtggaataattcagctc
actgtgcaagagccaccagatcctcctgaaatagaaatccgagaggtgagagcacgcagc
attgccctcagatggaccatgggatttgatggaaatagcccgatcacaggctacgatatt
gaatgcaagaacaagtctgactcctgggattctgttcagcgaaccaaagacgtctctcct
cagctgaaccaggccactataattgacctccatccttcctccacctacaacatccgcatg
tatgccaaaaaccgcattggcaagagcgaagcaagcaatgagctcactatcactacagat
gaagcagctcctgatggcccacctcaggaagttcagcttgagcctgtatcttcacaaagc
attcgggtcacttggaaagctccaaagaagcacttgcaaaatggaattattcgtggatac
cagataggctaccgggagtacagtgcagggggcaatttccagttcaacatcatcagtatt
gacaccactggagatagtgaagtttataccctggataacctgaaaaaattcacccagtat
ggcatggtagtacaggcatgtaaccgggctggaataggaccttcttctcaggaaatcatc
accactaccctagaggatgtgcccagttgccctccagggaatgtccaagccactgctaca
tcaccagaaactatctccatttcctggtctacacttcccaaagaagccctgaatgggatt
ctacagggattcagagttatttactgggctaatctcttggatggagagctgggagagatt
aaaaatgtcactactacacaaccctcactagagcttgatgggctggaaaaatatactaac
tacagcatccaggtgttggcattcacacgagctggagatggagtcaggagtgaacaaatt
ttcacccgcactaaagaggatgttccaggtcctcctgctggagttaaagcagctgcagca
tcaccatccacagtatttgtgtcctggctccccccatttaagttaaatggtgtcatccga
aagtacaccgtgttctgctcacacccctaccccacagtaatcagcgagtttgaagcctct
cctgactcattttcctacagaatccccaacttgagtcggaatcgacaatacagtgtctgg
gtggtggctgtcactgctgcaggaagaggcaacagcagcgaaattatcaccgtggaacca
ttggctaaagctccagccagaattctgacattcagtggcacagtaacaaccccttggatg
aaggatatcgtccttccttgcaaggccgttggggacccatctccgacagtcaaatggatg
aaggatagtaacgggacgcccagtctagtgatgattgatgggcgaagaagcatctttagc
aatggcagctttgttatccgtactgtgaaagcagaggattctggatattacagctgcgtg
gccagtaacaactggggatctgatgaaattattttgaatttgcaggtgcaagtgccacca
gaccagccaagacttactgtgtccaaaaccacatcttcttctatcactctttcctggata
cctggagacaatggtggtagttctatccgaggttacatactgcagtactctgaagataat
agtgagcagtggggtagttttcccattagccctagtgaacgatcctaccgtttagaaacc
ttgaaatgtggtacctggtacaagttcacactaactgctcaaaatggagtgggaccagga
cgcatcagtgagatcatagaggccaaaacacttggaaaagagccacagttttccaaagaa
caagaactctttgccagtattaacaccactcgagtgcgattgaaccttattggctggaat
gatggtggttgtccaatcacctcctttactctggagtaccgaccatttcggaccacagta
tggacaacggctcagcggacgtcactttctaagtcctacatactttatgacctccaggaa
gcaacttggtatgaactgcaaatgagagtgtgcaacagtgcaggctgtgcagagaaacag
gccaaatttgccacactcaactatgatggcagtacaatccctccactcattaaatcagtt
gtccaaagtgaggaaggtctggcgaccaacgaagggctaaagatgctggtgaccatttcc
tgtatcttggtgggggtcttgctgctttttgtgcttctgctgattgtgcgaaggaggagg
agggagcagagactgaagagactcagagatgcaaagagtttggctgaaatgcttatgagt
aagaacaccaggacctcagatacacttaacaagcagcagcagacgctgaggatgcacata
gatattcccagagctcagcttctgattgaagaaagggacacaatggagaccattgatgac
agatcaacagtgttattaactgatgctgattttggagagacatctaaacagaagtcattg
acagttactcatacagtacattaccagtctgtctcacaagctactggaccattggttgat
gtttctgatgcccggccaggaacaaatcctactacaagaaggaatgcaaaaactgggccc
acagctcgcaacaggtacgctagtcaatggactctcaacagaccccatcccactatatca
gcccacaccctcaccacagattggaggctgccaacacccagagctgcaggatcagtagac
aaggaaagtgacagctacagtgtcagcccctcacaggatacagatcgagcaagaagcagc
atggtctccacagaaagtgcctcctccacgtacgaagagctagcgagagcatatgaacat
gctaagatggaagagcagctgagacatgccaagttcacaattacagaatgctttatatca
gacacatcatcggagcagctaacggcagggactaatgagtacacagacagtctgacctca
agcacaccatcagaatcggggatctgcagatttactgcttcgccccccaaacctcaggac
ggagggcgtgtgatgaacatggcagttccaaaggcacatcggccaggtgacctcatgcat
ttgccaccgtatcttagaatggactttttgttgaaccgaggagtttcaggcacaagcaga
gacctgggtttgggccaagcctgcttggaacctcagaaaagccgaaccttgaagcgtccc
acagttctggagccgatacctatggaaacatcctccacgagagaagtacagtcatggcaa
cctggtgccgtggcaacattacctcagcgagaaggggctgagctaggacaagcagctaaa
atgagcagctcccaagaatccctgctggactcccggggccacttgaaaggaaacaatccc
tacgcaaaatcttacaccctggtataa
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integrated database retrieval system
