Trachemys scripta elegans (red-eared slider): 117867833
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Entry
117867833 CDS
T07347
Symbol
YBX1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117867833 (YBX1)
03019 Messenger RNA biogenesis [BR:
tst03019
]
117867833 (YBX1)
03041 Spliceosome [BR:
tst03041
]
117867833 (YBX1)
Transcription factors [BR:
tst03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
117867833 (YBX1)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
117867833 (YBX1)
mRNA cycle factors
Common to processing body (P body) and stress granule
117867833 (YBX1)
Spliceosome [BR:
tst03041
]
Common components
Common spliceosomal components
General mRNP proteins
117867833 (YBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
117867833
NCBI-ProteinID:
XP_034609065
LinkDB
All DBs
Position
19:complement(19944606..19964670)
Genome browser
AA seq
325 aa
AA seq
DB search
MSSEAETQPPAAPLPAAAPAAPAESKPNGGTGNGGGGLASAAPPAGGDKKVIATKVLGTV
KWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAA
NVTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSDSIPEGQAQ
QRRPYRRRRYPPYYMRRPYGRRPQYSNPPVQGELVEGADNQGAGEQGRQVRQNMYRGYRP
RFRSLIFRGPPRQRQPREEGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQD
GKETKAAEPPAENTSAPEAEQGGAE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacccagccgcccgccgcccctctccccgcggcggcccccgcc
gcccccgccgagtccaaaccgaacggcggcaccggcaacggtggcggcggcctggcctcg
gcggcgccccccgccggcggggacaagaaggtcatcgcaacgaaggttttgggaacagta
aaatggttcaacgtaagaaacggctacggtttcatcaacaggaatgacaccaaggaagat
gtgtttgtacaccagactgccataaagaagaataaccccaggaagtaccttcgcagtgta
ggtgatggagagactgtggagtttgatgtggtggaaggtgaaaagggtgcagaggcagct
aatgttacaggtcctggtggagttccagtacaaggcagtaaatacgcagcagaccgtaac
cattacagacggtatccacgacgtaggggtcctccacgcaattaccagcaaaattaccag
aacagtgagagtggggaaaagaacgagggatcagatagcataccagaagggcaagcccaa
cagcgccgtccctaccgcaggcggcggtacccaccttactatatgcgtagaccctatggg
cgtcgaccacaatattccaaccctcctgtgcagggagagttagtggagggtgctgacaac
cagggtgcaggagaacaaggcagacaagtcagacagaatatgtatcgggggtacagacca
cgatttcgcagcttgattttcaggggtcctcctcgtcaaagacagcctagggaggaagga
aacgaagaagataaagagaaccaaggggatgagacccaaggtcagcagccacctcaacgt
cggtaccgtcgtaacttcaactaccgacgcagacgcccagagaaccctaaaccacaagat
ggcaaagagacgaaggcagccgaaccaccagctgagaacacgtccgctcccgaggctgag
cagggcggggctgagtaa
DBGET
integrated database retrieval system
