Trachemys scripta elegans (red-eared slider): 117867970
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Entry
117867970 CDS
T07347
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00310
Lysine degradation
tst01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117867970 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117867970 (PRDM2)
03036 Chromosome and associated proteins [BR:
tst03036
]
117867970 (PRDM2)
Enzymes [BR:
tst01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
117867970 (PRDM2)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
117867970 (PRDM2)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117867970 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
zf-C2H2_6
zf-C2H2_ZNF462_1st
zf-C2HE
zf-H2C2_2
zf-C2H2_11
PyrI_C
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
117867970
NCBI-ProteinID:
XP_034609381
LinkDB
All DBs
Position
19:13141157..13259324
Genome browser
AA seq
1783 aa
AA seq
DB search
MNQNTTESAGAAETLADVPEHVLKGLPEEVSLFPSAVDKTRLGVWATKSILKGKKFGPFV
GDKKKRSQVKNNVYMWEVYYPNLGWMCVDATDPRKGNWLRYVNWALSGKEQNLFPLEINR
TIYYKTLKPIAPGEELLVWYNGEDNPEIAAALEEERAAHRSKRHSPKAKKDQVEDPAGSS
SHVGPFRNLMSGMPPCVCERADCGSENLGTLHVLVYGPGDPIFLFTPTPASPEGKKKECK
NKGKKAIDTKQRKTDLDFTSTDMRESKEDHKEEDEKPSVSAVLSLEQTAVIQEMVNQDVL
PKLMIPSPTSEPRTMPEDKPGAITCGSDDLEEEEEEEEEEEEEEEEDEEVEDANLPEESP
GKEPTAVCEEKLESMEEQKSISEESLENSPKKTPVVKIPKAKGVSNGDFQETFMFPCQHC
ERKFTTKQGLERHMHIHISSVNHAFKCRYCGKAFGTQINRRRHERRHEAGPKRKPFLTLT
SAPQSDDVADGQTFADDGLKDELNVSNLVQDFAVLDSEKVSQEMSNSTLVEENKEPKELH
PCKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGFILEEPQLQTEQAQPAQSVYIAST
ELEEDGEADDIYIMDISSNISENLNYYIDGKIQSNSSTSNCDVIEMESNSADLYGINCLL
SPVTVEISQNLKSTQIHMTDLPKEPSSGGSNESKKRRTTSPPLLPKIKTEIDPEPITPSC
SLNLPLSISTAESLPFHKEKSVYLSSKLKQLLQTQDSKKITPAATEIPKLGPSATSSPIL
PSVSSRFKRRTSSPPSSPQHSPALRDFGKQSDGKTIWNDTVLASKMPKLESHSNSPVWSL
CGREERQTMSPLSFDDYKIPKEWTATPTFGSVCNQQPLDLSSGVKQRSDVKSKTQVPWES
VLDLSVHKKPYSDTEVKEYKENNSVQPTCSGIKKKKPTTCMLQKVLLNEYNGTDIATEST
PDLTLNRSPSPCKSSVPQPEPDVDPDVSAPTVESPSHSSPASPLPQTSAISSLCQLPPLL
TPTDPSSPPPCPPLLTLATQPPPLLPTIPLPLPGASASVTPTPSCPSPLYNTATQSPLPI
LSPTVSPSPSPVPSVELFTTASPGPPNLSSSSSSSSSSSSSFSSSSSSSSCSSSSSFSSS
SSSPSPPPLSVVSSVVSPADHLESTLPIIAFKQEEMESEHVKPREDPETSSEADVVRETF
NKSFVCNVCESPFLSIKDLTKHLSVHAEEWPFKCEFCVQLFREKTDLSEHRFLLHGVGNI
FVCSVCKKEFAFLCNLQQHQRDLHPDKECTHHEFESGTLRPQNFTDPSKANVEHMQSLPE
VSLEPSKEEEDEDLNDSSEELYTTIKIMASGVKSKDPDVRLGLNQHYPSFKPPPFQYHHR
NPMGIGATATNFTTHNIPQTFTTAIRCTKCGKSVDNMPELHKHILACASASDKKRYTPKK
NPVPLKQTVQPKNGMVILAGPGKNAFRRMGQPKRLNFNVEMSKLSSNKLKLSALKKKNQL
VQKAILQKKKSAQQKADLSNSVSESDSHICPYCNREFTYIGSLNKHASYSCPKKPISPSS
KKNSSKKSGSFSSSTSGDKGNNQRRRTADAEIKMQSMQAHLGKTRARTSGPVQIQLPTAS
FKSKQNVKFIPPIRSKKPSPSSVLRNSSPVRVAKMTHIEGKKTKVVAKNHSGISSKTSRK
LHVRIQRNKAVLPSKSAVANKKKTDRFSVKSRERVGGPITRSLQQAANADTIENKREESS
TKQELKDFSYRLRMASRCPPSSSQNTCTRQCKKSNCTTAHFKE
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaacacaactgaatctgcaggagcagctgagaccttggctgatgtacctgaa
catgtgcttaaaggacttcctgaggaagtgagtcttttcccatctgctgttgacaagaca
cggcttggtgtctgggcaacaaagtcaattttaaaaggcaaaaaattcggaccgtttgtt
ggtgacaagaaaaaaagatcccaagttaagaacaatgtatacatgtgggaggtatattac
ccaaacttgggatggatgtgtgttgatgcaactgatccaaggaaaggaaactggctgcga
tatgtgaactgggcactttcgggaaaggagcaaaatctattccctttggagatcaacagg
accatttactacaaaaccttaaagccaatcgcgccgggcgaggagctgttagtctggtac
aatggggaagacaaccccgagatagcagctgctctggaggaagagcgagccgcccaccgc
agcaagaggcactcgccgaaagccaagaaagaccaagtggaggatccagctggtagtagc
agccatgtaggacccttcaggaacctgatgagtggaatgcctccctgtgtgtgtgaaaga
gcagactgtgggtcagaaaacctcggaacactacatgtcttggtgtatggaccaggagac
ccaattttcctcttcaccccaactccagcttcaccagaagggaagaaaaaggagtgtaaa
aacaaggggaaaaaggcaatagatacaaagcagagaaagactgatttggattttacttcc
acagatatgagggagtctaaagaagaccataaagaggaagatgaaaagccatctgtttct
gctgtgctgtcactggaacaaacagccgtgattcaggagatggtaaatcaagatgttctt
ccaaaactaatgatccccagtcctaccagtgagccacgaacaatgcctgaagacaaacca
ggagcaataacttgtggatcagatgatttggaggaggaggaggaggaggaggaggaggag
gaggaggaggaggaagaagatgaagaggtggaagatgctaatttacctgaagaaagtcct
ggaaaagagcctacagctgtatgtgaagaaaagctagaatctatggaggaacaaaaaagc
atatcagaagaatctctagagaactccccaaagaaaacaccggttgtaaaaattcctaaa
gcaaaaggtgtatcgaatggtgatttccaggaaacatttatgtttccctgtcagcattgt
gagaggaagtttacaacaaagcaaggacttgaacgccacatgcatattcatatatctagt
gtcaatcatgctttcaaatgccgatactgtgggaaagcctttggcactcaaattaatcgg
cgaaggcatgagcggcgtcatgaagcagggccaaaaagaaaaccattcttaacactaact
tcggccccgcagtctgatgatgttgctgatggacagacatttgcagatgatggtcttaaa
gacgaattaaatgtttccaatcttgtgcaagactttgcagtcttggattctgagaaggtc
tcccaagaaatgtcaaattctacccttgttgaggagaacaaggaacccaaagaattgcat
ccttgcaaatattgtaaaaaggtttttggaacgcatactaacatgcgtaggcaccagcgt
agggttcatgagcgtcatcttattcccaaaggtgtcaggagaaaaggattcattcttgaa
gaaccgcaacttcaaactgagcaggcccaaccagcccagagtgtgtatatagcaagtaca
gaattagaagaggatggtgaagctgatgacatatatattatggatatttctagcaatatc
tcagaaaatttaaattactatattgatggtaaaattcagtccaacagtagcactagcaat
tgtgatgtgattgagatggaatccaattctgcagacctgtatggaataaattgtttactt
agtccagtcacagtggaaatttctcagaatttaaagtctacacaaatacacatgactgac
cttcctaaggagccttctagtggtggaagcaatgaatccaaaaagaggagaacaaccagc
cctcctcttttacctaaaataaaaactgaaatagatccagaacctataactccttcatgt
tcgttaaatcttcctcttagcatttcaacagctgagagcttaccttttcataaagaaaaa
agtgtttatttgtcgtccaagttaaaacaacttcttcagacacaggatagtaaaaagata
actccagcagcaactgaaatccctaaattaggtccttctgctacatcttcacccattttg
ccttcagtatctagtaggtttaaaaggagaaccagctctcctcccagttctccacagcac
agtccagcgcttcgagactttggtaaacaaagtgatggaaaaaccatatggaatgataca
gttctagcttcaaagatgccaaaattagaaagtcacagcaactcacctgtatggagctta
tgtgggagggaggaaagacagactatgagtcctctgagttttgatgactataaaatacct
aaggaatggacagcaactccaacttttggtagcgtgtgcaaccagcagccattggattta
tctagtggtgtaaaacaaaggtctgatgtcaaaagcaagactcaggttccttgggaatca
gtgttagatctaagtgtgcataagaagccatatagtgacactgaagttaaggaatacaaa
gaaaataattcagtgcagccaacatgcagtggtattaaaaagaagaaaccaaccacatgc
atgttacaaaaagttctgctgaatgaatataatggaacggatatagctacagaaagcaca
cctgatttgactttgaatagaagcccaagtccatgtaaatcatcagtaccccagccagaa
cctgatgttgatcctgatgtgtcagcacctactgttgagtccccttctcatagttcccct
gcttcccctttacctcaaacatctgctatatcctccttgtgtcagctgccccctcttcta
acgccaacggatccttcctccccaccaccttgtcctcctttgttaacacttgctacgcaa
ccccctccactccttcctactattcctttaccacttccaggtgcctctgccagtgtcact
cccactccttcatgcccatcaccactgtataacactgctacacagtccccacttccaatc
ctttcacctacagtatctccctctccatctcctgttccttctgttgaactttttactact
gcttcacctggtccaccaaacctctcctcctcctcctcctcctcgtcctcatcttcctct
tctttctcctcctcttcttcctcctcctcttgctcttcctcctcctccttctcctcctct
tcatcatctccttctcctcctcctctttcagtagtttcttctgttgtttcccctgctgat
catctggaaagtactctccccataatagcttttaaacaagaggaaatggaaagtgagcac
gtgaagccaagagaagatccagagacttcaagtgaagcagatgtagttcgggaaacgttc
aataaaagctttgtgtgcaatgtctgtgaatcaccttttctttctattaaagacctaact
aagcatttatctgttcatgctgaagaatggcccttcaaatgtgaattctgtgtacagctg
tttagagaaaaaactgacttgtcagaacatcgctttttgcttcatggagtaggaaatatc
tttgtatgctcagtctgtaaaaaggaatttgcctttttgtgcaatttgcaacaacatcag
cgagatctccatccagacaaagaatgcacacatcatgagtttgaaagtgggactctaaga
ccccagaattttacagatcccagtaaggcaaatgtagaacatatgcaaagcctaccagaa
gtttccttggaaccctcaaaagaagaggaggatgaagatctaaatgactcctctgaagag
ctttatactaccataaaaataatggcttctggagtaaagtcaaaagatccagatgttcgt
ttgggcctcaatcaacactatccaagctttaaaccacctccatttcagtatcaccatcga
aatcctatgggtattggagccactgctacgaatttcactacccataatattccacagacc
tttactactgccattcgttgtacaaaatgtgggaaaagcgttgataacatgcccgaatta
cacaaacacatcttggcatgtgcctctgccagcgacaaaaagagatacacgcccaaaaaa
aatccagtaccactgaagcagactgtgcagcctaaaaatggcatggtcattctagctggc
cctgggaaaaatgccttcagacgaatgggacaacctaaaagacttaatttcaatgttgag
atgagcaaattgtcttctaataaactaaaactaagcgcattgaagaagaaaaatcagctt
gtccaaaaagcaatcttgcaaaaaaagaaatcggcacagcagaaggcagacttgagtaat
agtgtatctgagtcagactcccacatctgcccctactgtaatagagaattcacttacatt
ggaagcttgaacaaacacgcatcttacagttgtcccaaaaaacccatctccccttcctct
aaaaaaaattcatccaaaaaaagtgggagcttctcctcatccacaagtggcgacaaaggc
aacaaccagcgccgacgaacggcagatgcggagatcaaaatgcagagtatgcaggctcac
ttgggtaagacgagagcacgaacctcaggacctgtgcagattcagctgcctaccgcatcc
ttcaaatcaaagcaaaatgtaaaatttatacctccaattagatccaaaaagccaagtccc
tcttcagtgttaaggaactccagccctgtaagagtggccaaaatgactcacattgagggg
aaaaaaactaaagtggtagccaagaatcattctggaatctcaagcaaaacatcccggaaa
ctgcatgtccgaatacaaaggaataaagccgttttgccaagtaagtctgctgtggcaaac
aagaaaaagacagataggttcagtgtaaaatctagagagagggttggaggacctatcact
cggagcttacagcaggcagctaatgcagacacaatagaaaacaagagagaagagagcagt
acaaaacaagaactaaaagatttcagttacagactccgcatggcctctagatgtcccccc
tcctcttctcagaacacctgcaccaggcaatgcaagaaatccaactgcacgacggcccac
ttcaaggaatag
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integrated database retrieval system
