Trachemys scripta elegans (red-eared slider): 117868052
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Entry
117868052 CDS
T07347
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117868052 (U2AF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tst03041
]
117868052 (U2AF1)
Spliceosome [BR:
tst03041
]
Complex A
U2 snRNP components
U2 related factors
117868052 (U2AF1)
Complex B
117868052 (U2AF1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
117868052
NCBI-ProteinID:
XP_034609540
LinkDB
All DBs
Position
1:complement(192745580..192767993)
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AA seq
248 aa
AA seq
DB search
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGGGGGGGGGGGGGRERDRRRSR
DRERSGRF
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtatctggcctccatcttcggcacagagaaggacaaagtcaactgttcattt
tatttcaaaattggagcttgccgtcacggggacagatgttctcgattgcacaataaacca
acatttagccagaccattgccctcttgaacatttaccgtaaccctcaaaactcttcccag
tctgctgacggtttgcgctgtgctgtgagcgatgttgaaatgcaggaacattatgatgaa
ttctttgaggaggtcttcacggaaatggaagaaaaatatggtgaagttgaggaaatgaac
gtttgtgataaccttggagatcatctagttggaaatgtatatgtaaagtttcgtcgtgaa
gaagatgcagaaaaggctgtgattgatctgaacaatcgctggtttaatggtcagccaatt
catgctgaactttcacctgtgactgacttcagagaagcttgttgccgtcaatatgaaatg
ggagagtgtacgcgaggaggtttctgtaactttatgcatttgaagcccatttcccgagaa
ttgcgacgtgaattatatggacgtcgtcgtaagaagcatagatccaggtcaaggtcccgt
gaacgtcgttctagatccagagatcgtggtcgtggaggtggcggaggaggaggaggcggc
ggtggtggcggcggcggcggaggaggaggaggacgagaacgtgataggaggcggtcaaga
gatcgtgaaagatctggtcgattctga
DBGET
integrated database retrieval system
