Trachemys scripta elegans (red-eared slider): 117868114
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Entry
117868114 CDS
T07347
Symbol
RRP1B
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B
KO
K14849
ribosomal RNA-processing protein 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tst01009
]
117868114 (RRP1B)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tst03009
]
117868114 (RRP1B)
Protein phosphatases and associated proteins [BR:
tst01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117868114 (RRP1B)
Ribosome biogenesis [BR:
tst03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117868114 (RRP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
117868114
NCBI-ProteinID:
XP_034609620
LinkDB
All DBs
Position
1:193242647..193272524
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AA seq
793 aa
AA seq
DB search
MERVSRFQRAGGRDAFYPAEGGGAKGDGGAGTMAPAAAAAAAVQPPEIQFAQRLAANEKR
SRDRAVKKLRGYISLRTQSPAGGFSQEELLKIWKGLFYCMWMQDKPLLQEELASTISQLI
HVVQNIEAQHLFIQTFWQTMNREWNGIDRLRLDKYYMLIRMVLRQSFEVLKRNGWDESLI
EPFLHLLMKEVIHPESNAPNGIKFHFIDIYLEELAKAGAKELTADQNLKFIEPFCKIAAK
SKDRHLMQAVARGIFEAIVDQSPFAIEDLMKELKTSCDGDVELSEGDEAENKEPLVTKDK
RLSKKSALGIEVQEDLSENADENIGPVLQFNYKAVADRLFELASRKNTPAFNRKRLYKLV
KKFQDLAEGIFPQDDFPEDVSTDEDDDTFSRGRRKKKVVKSVEKAKLEKEREKDGKEASS
TEEDDASGLQKKRKRRKKRDCQIADSSTADGRSEEEVPDAIGPKEPNKGRAPETSKRKRK
NKSLDKEATETGIGVTGSEGDGDNCAQDARTDVMQTKRRQLKKKNTKLQKVHVKPVSQNG
PANANALWDGSDCATVTTTKMVKKKQKMRTVLLNGLSEQAALQSEQESLQNSPTGEGDSE
STLPPKVKWKKKPKLGSLDGLRVSNQKPPSLKKKRKIKEVINSVEVKGVLEAACKKSKKS
EVGGTLTPLKKTKAKTGNDFVKFEKTTLPKPVFFRKAKGSLSSTRASVQLNKLQCSSSKK
VTFGLNKNMTAEFKKTDKSILVSPEGASRVAFNPEQKPPHGVLKSPGTPTAEPQMKKSFV
TPAKKRPTAMDFF
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcgtcagccggttccagcgggccggcgggagggacgccttctacccagcagag
ggcgggggagcgaagggggatggtggagcagggaccatggctcctgccgccgctgctgct
gccgccgtgcagccgcccgagatccagttcgcgcagagattggctgccaacgagaagcgg
agccgggaccgggcggtgaagaagctgcgcggctacatcagcctcaggacccagagcccg
gcgggtggcttcagccaagaagaattattaaaaatatggaaaggactattttactgtatg
tggatgcaggataaacctctgctacaggaggaactagcaagtactatctcccaacttatc
catgtcgttcagaatatagaggctcagcacctgttcattcagaccttttggcaaaccatg
aaccgtgaatggaatgggatagacagattgcgccttgataaatactacatgctaatccgc
atggttttgaggcagtctttcgaggtactgaaaagaaatggatgggatgaaagtctgatt
gagccatttctgcatctgctaatgaaggaagtcatacacccagaaagtaatgctcccaat
gggataaaattccattttattgacatctatctggaagaactggctaaagctggagccaag
gagctcacagcagaccagaatctcaagtttattgaaccattctgcaaaattgctgccaaa
tctaaagatcgtcacctgatgcaggcagtagccaggggtatctttgaagccattgtggat
cagtccccttttgccattgaagatctaatgaaagaattgaaaacaagctgcgatggcgat
gttgagctgtcagagggagatgaagctgaaaacaaggagccactagtgaccaaagacaaa
cgtttatcaaaaaaatctgcactgggcattgaagtgcaagaggacctttctgaaaatgct
gacgaaaacattggtcctgttctccagtttaactacaaagctgttgctgacagactcttt
gaattggccagcagaaaaaatacacctgcctttaacagaaaacgtctgtacaaattggtc
aaaaagttccaggacctagcagaaggaatcttcccacaagatgatttccctgaagatgtt
tctacagatgaagatgacgatacattcagcaggggcaggcgaaagaaaaaagttgtcaaa
tccgtggagaaagccaagctggaaaaagagagagagaaggatggaaaagaggcatcaagt
acagaggaagatgatgcatcaggactccagaagaagaggaagaggcggaagaagagggac
tgtcaaattgcagactccagcacagctgatgggagaagtgaagaggaggtacctgatgca
attggacccaaagaacccaacaagggcagagcaccagaaactagtaaaagaaaaagaaaa
aacaaatctctagacaaagaggcaactgagactggaattggcgtaactggcagcgaagga
gatggtgacaactgtgcacaggatgctcggactgacgtaatgcagactaaaaggagacag
ctcaagaaaaagaacacaaaactgcagaaggttcatgtaaaacctgtatctcaaaatgga
ccagctaatgccaatgccctgtgggatggcagtgactgtgccactgtaacgactaccaag
atggtgaaaaagaaacagaaaatgaggactgtcttactcaatggcttatctgaacaggct
gctctgcagtcagaacaggaaagcttgcagaatagccctacaggagaaggggactctgaa
tccacactgcccccaaaagtcaaatggaagaaaaaacctaagttgggcagtttagatggg
ctcagggtctcaaaccagaaaccaccatccctgaaaaagaagaggaagatcaaggaggtg
ataaactctgttgaagtgaagggagttctggaggctgcatgcaagaaaagcaaaaagagt
gaggttggtggcactctcactccattaaagaaaacaaaggcaaagacagggaatgacttt
gtgaaatttgaaaaaacaactttaccaaagccggtgttcttcaggaaagccaaaggcagc
ctctcttcaaccagagcctccgtgcagttaaacaagctgcaatgttccagctccaaaaaa
gtcacctttggattgaataagaacatgactgcagaatttaaaaagacagacaaaagtatc
ttagtgagcccagaaggagcctcacgggtggctttcaaccctgaacaaaagcctccccat
ggggtgctgaagtcacctggtacacccacagcagagccccagatgaagaaatcatttgta
acaccagctaagaagagaccaacggctatggacttcttttaa
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