Trachemys scripta elegans (red-eared slider): 117868144
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Entry
117868144 CDS
T07347
Symbol
TRAPPC10
Name
(RefSeq) trafficking protein particle complex subunit 10 isoform X1
KO
K20307
trafficking protein particle complex subunit 10
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117868144 (TRAPPC10)
Membrane trafficking [BR:
tst04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
117868144 (TRAPPC10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
NTS_TR130
SNAP
Motif
Other DBs
NCBI-GeneID:
117868144
NCBI-ProteinID:
XP_034609667
LinkDB
All DBs
Position
1:193707437..193796772
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AA seq
1272 aa
AA seq
DB search
MDPAAAAAAEEEEKPQPQPQQPPVIYTMENKPIVTCAGDQNLFTSVYPMLSQQLPKEPME
WRRSYGRAPKMIHLESNFVQFKEELLPKEGNKALLTFPFLHIYWTECCDTEVYKATVKDD
ITKWQNVLKVHSSVDWLIVVVESDAKKKNKTNILPRTSIVDKIRNDFCNKQSDRCVVLSD
PLKDSSRSQESWNAFLTKLRTLLLMSFTKNLGKFEDDMRTLREKRTEPGWSFCEYFMVQE
ELAFVFEMLQQFEDALVQYDELDALFSQYVVNFGAGDGANWLTFFCQPVRSWNGLILRKP
IDMEKRELIQNQEATLLDLRSYLFSRQCTLLIFLQRPWEVSQRALELLHNCVQELKLLEV
SVPPGALDCWVFLSCLEVLQRIEGCCDRAQVDANVSHTVGLWTYATEKLKSLGYLCGLVS
EKGPNSEDLNRTVDLLAGLGAERPETANTAQSPYKKLKEALSSVEAFEKHYLDLSHAIIE
MYTNIGRIRSAKLVGKDLAEFYMRKKGPQKAEVYLQGALKTYLAEGWALLITHTRKQLAE
CQKHLGQIENYLQTSSLLASDDHLTKDERQHFCQEILNFANQQTEGKGQKVILSMHSFAQ
LKTLHFDPPNAVIHVGGTLSIELTLLSQMPVPVEVDQIAVNVHFSIEKSNYRKTAEWLTK
HKTSNGIISFPNEVAGFPFSRNNLPALELYEMYERSPSDNSLNTTGIICKNVHMLLRRQE
SSSSLEMPSGVTLEDGAHMLRCSNFILEPGVNTITFRTQAKEPGTYTLRQLCTSVGKVHF
VLPHIYPVVQYDVYSQEPQLKVEPLTDSLLAGIPQRVKFTVTTGHYTMKSGDTLQLSNAD
VMPFLYHPESKALIYSNTKEKVSESSLLIQSSEKITSITLPVAPAYHVIEFDLEVIYLPS
TPTASVESENLVNKELHRKSKEKQKMDNCMATVDQKVTIDCPWSIYSTIIALTFSVPFNA
KHSLLSAGKRKYVQVCVQNLSELCFQLSDNNLKNFGNCIDLQLVPLKPESQQHIYSKQSV
FFVWELKWTKELPPSLQCQFSVSFCPDTSEEQSFFLKPYTYEFQVENYFTLYNVKAQIFP
PLGVEYCKTGSLCSLEVSITRLSDLLDVDKDEALTESDEYCTTKLMYEVVDNSSNWAVCG
KSSGVISMPVAAHATHKVHMEVMPLFAGYLPFPDVKLFKYLPHHSAHSMQLDADSWIEND
NLSVDKNMDDQADNSSIKSRGSLHSAASGEHKGLPMPRLQSFSPGQVFNSSTSMQILVIP
SKDDHVLEVNIT
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgccgcggcggcggccgccgaggaggaggagaagccgcagccacagccgcag
cagcccccggtgatctacaccatggagaacaagcccatcgtgacctgtgctggagatcag
aatttattcacttctgtatatcccatgctttctcagcagcttccaaaagaacccatggaa
tggagaaggtcttatggacgtgctcctaagatgattcatcttgaatctaattttgttcaa
tttaaagaggagttgttacccaaagaaggaaacaaggctctcctgacttttcccttcctt
catatttattggacagaatgttgtgatacagaagtgtacaaagctacagtaaaggatgac
atcaccaagtggcagaatgttctgaaagtgcacagctctgtggattggttaattgtggta
gttgagagcgatgcaaaaaaaaagaacaaaaccaacatccttccccgaacatctatagta
gataaaataagaaatgacttctgtaacaagcaaagtgacagatgtgtggtactgtctgac
cccttgaaagactcttcccgttctcaggaatcctggaacgccttcctgacaaaactcagg
acgctgcttctcatgtcttttaccaaaaatctaggcaagtttgaagatgacatgagaact
ttgagggagaagaggactgagccagggtggagtttttgcgagtatttcatggtccaggaa
gagctggcctttgtctttgaaatgctgcagcagtttgaagatgccttggtgcagtatgat
gaacttgatgccttgttctctcaatatgttgttaactttggtgctggtgatggagcaaat
tggttgacatttttctgccaaccagtgcggagctggaatgggttgattctccgtaaacca
atagatatggagaaacgagagctaattcagaatcaagaagccactctattagacttgcgc
agttacctgttttctcgccagtgcacgttgctgatcttcctacagagaccgtgggaagtg
tcccagcgagcactagagcttcttcacaattgcgtgcaggagcttaagctactagaagtc
tctgttcctcctggagctttggattgctgggtatttttgagctgtttagaggtcctacaa
agaatagaaggctgctgtgaccgagcacaagtagatgccaatgtttcccacacagttggc
ttatggacctatgccactgaaaagctaaaatcccttggttacctgtgtggacttgtgtca
gaaaagggacctaattcagaagatcttaacagaacagttgatctgttagcaggcttggga
gcagagcgccctgaaacagccaacaccgcacagagtccttataagaaactcaaggaggcc
ttatcatctgtagaagcttttgaaaaacactacttagatctgtcccatgccatcattgaa
atgtacacaaatattggaagaattcgctcggctaaacttgttggaaaggacttagcagag
ttttatatgaggaagaagggtccacagaaggcagaggtctatcttcaaggagcactaaaa
acttaccttgctgagggctgggcattgcttatcacacatacaagaaagcagttagcagaa
tgtcagaaacaccttggacaaattgaaaactatcttcaaacaagcagtcttttagccagt
gatgatcacttaacaaaagatgagcgccagcacttctgccaagaaattttaaattttgcc
aaccagcaaacagagggcaaaggtcaaaaggttatactgtctatgcattcctttgcacag
ctgaaaactctacattttgaccctccaaatgctgttatccatgtgggtggaacattgtct
attgagctgactttgctgagccaaatgcccgtcccagtcgaagtggatcagattgccgtc
aatgtccacttcagcattgagaaaagtaattaccggaaaacagctgaatggctcactaaa
cacaaaacttccaacggtattatcagcttcccaaatgaggttgcaggcttccctttctca
agaaataacttgccagcactggagttatatgaaatgtacgaaaggagcccttcggataac
tctttgaacacgacgggaataatctgcaaaaatgtgcacatgctactgcgaaggcaggag
agcagctcttctctggaaatgccctcaggggtgactctagaggatggggctcacatgtta
agatgtagcaactttatactggaaccaggggtcaatacaataacattcagaactcaggcc
aaagaacctgggacatatactctcaggcagctgtgcacgtcagtgggtaaagtgcacttt
gtccttcctcacatttacccagttgtgcagtatgatgtgtactctcaggagccccagcta
aaagtggagccattgactgacagccttttggctggtattcctcagagggtgaaattcaca
gtgactactggccattataccatgaagagtggagatactctgcagctcagtaacgccgat
gtcatgcctttcctgtaccatccagagagcaaagcattgatctattccaataccaaggaa
aaagtctcagaatcatcattactgatccagtcttctgaaaagatcacaagcatcaccctg
ccagtggctcctgcatatcacgtgattgaatttgacctagaagttatctatttgccatca
accccaacagcttcagtggaaagtgaaaatctggtaaataaagaactgcacaggaaaagc
aaagagaagcagaaaatggacaactgcatggctacagttgaccaaaaagtaaccattgat
tgtccatggtcaatttactccaccattattgcattaacgttcagtgtaccttttaatgcc
aagcattccttactgtcagctggcaaacggaaatacgtacaggtttgtgtacagaatttg
tcagaactctgtttccagctgtccgacaataacctaaaaaattttggtaactgcatagat
ctacagctggtacctctgaagccagaatcccaacagcacatatacagtaagcagtcagta
ttctttgtgtgggaattgaagtggacaaaagaacttcccccctctttgcagtgccagttt
tcggttagcttttgtccagatacctctgaagagcagtcattcttcttgaagccgtacact
tacgaattccaagtggaaaattattttacattgtataatgtgaaagctcagatttttcca
ccattgggggtggagtattgtaaaacaggctcactctgctctttggaggtgtcaatcacc
cgactctctgacctcttagatgtggataaagatgaagcattaacagaatcagatgagtac
tgcacgacaaaacttatgtatgaagttgttgacaacagtagtaactgggcagtctgtgga
aaaagttcaggagtaatatctatgcctgtagcagctcacgcaactcacaaagtgcacatg
gaagtgatgccactttttgctggatacctcccctttcctgatgtcaaactatttaaatac
ctccctcatcattctgctcactccatgcaacttgatgctgacagttggattgaaaatgat
aacctatctgtggacaagaatatggatgatcaggctgacaacagtagcataaagagtaga
ggcagtttacattcagcagccagcggggaacataaaggtctgccaatgccccgtctacaa
tccttttcacctggtcaggtcttcaactccagcacaagcatgcaaatccttgtcattccc
agcaaggatgaccatgttctggaagtcaatatcacatga
DBGET
integrated database retrieval system