Trachemys scripta elegans (red-eared slider): 117868170
Help
Entry
117868170 CDS
T07347
Symbol
SDC3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04514
Cell adhesion molecules
tst04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117868170 (SDC3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117868170 (SDC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tst00535
]
117868170 (SDC3)
Proteoglycans [BR:
tst00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
117868170 (SDC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
117868170
NCBI-ProteinID:
XP_034609774
LinkDB
All DBs
Position
20:complement(14674105..14859892)
Genome browser
AA seq
401 aa
AA seq
DB search
MKLPWLAPGPRALGRLLPLLVLLAGQAALAQRWRNENYERPVDLEGSGDDDPFADDESDD
LYSGSGSGYFEQESGIETAVRLRTDTVPTTPAVLPVTSVQPVATPFEMLPAEETTPEQAT
SVLYIPRVTEAPAIPSWKATTPSATASDTPPPATAAAAASPTAPTAKPTTVRRILPPFVT
TTATTRATTLEMPTAAVTEASTVTEAATSRLVTPSTARPRAGPKSSTSRTVVVTEKSTVL
LPPAATLAPTDAPQTEPLDVTVSTALDNELEVPVSGGPSGDFEIREEEDTTLTELNNEVI
AAVTPAAGPGLGKNAEPGLIDNTIDSGNSAAQLPQKNILERKEVLIAVIVGGVVGALFAA
FLVMLLIYRMKKKDEGSYTLEEPKQANVTYQKPDKQEEFYA
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgccttggctggcgccggggccccgggcgctcgggcggctcctgccgctgctg
gtgctgctggccggccaggctgcgctggcacagcgctggcgtaacgaaaactacgagagg
cccgtggacctggaagggtcaggggatgacgacccctttgcggatgatgaaagtgacgac
ctctactcggggtctggctcgggatattttgagcaggagtctgggatcgagacggcggtg
aggctccgcacggacacggtccccaccaccccggccgtgctgcccgtcacatccgtgcag
cccgtggcaactccctttgaaatgctgcctgcagaggaaaccacccctgagcaggcgacc
agcgtcctgtacatccccagggtgacagaggcaccggcgattcccagctggaaagcaact
acccccagtgccacggccagtgacaccccgccacccgcaacggcagctgctgccgccagc
cccaccgctcccactgccaagccaacaaccgtccggaggatcctgccacccttcgtcacg
acgacggccacaacgcgggccaccaccctggaaatgccgaccgcagctgtgacggaagcc
agcacggtcacggaggctgccacttcccggctcgtcacccccagcactgccaggcccaga
gccggcccaaagtcgagcacctccaggaccgtggtcgtcacagagaaaagcacggtcttg
ctgccgccggctgctaccttggcccccacagacgcaccccagaccgagccgctggacgtg
actgtgtccacggccctcgacaacgagctggaggttcctgtcagtggagggcccagcggg
gacttcgaaatccgtgaggaggaagacacgactctgacggagctcaataacgaagtgatc
gccgcggttaccccggcagcagggccggggctggggaagaatgcagagcccggcctcata
gacaatacgatagactctgggaactcagctgcccagctcccccagaaaaacatcctggag
aggaaagaagtgctaatagctgtcatcgtgggcggtgtggtcggggcgctctttgctgcc
tttctggtcatgctgctcatctaccggatgaagaagaaggacgaagggagctacacactg
gaggagccaaagcaggcgaacgtcacataccaaaagcccgacaagcaggaggagttctat
gcataa
DBGET
integrated database retrieval system
