Trachemys scripta elegans (red-eared slider): 117868222
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Entry
117868222 CDS
T07347
Symbol
RBBP4
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03082
ATP-dependent chromatin remodeling
tst03083
Polycomb repressive complex
tst04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117868222 (RBBP4)
03083 Polycomb repressive complex
117868222 (RBBP4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
117868222 (RBBP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117868222 (RBBP4)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
117868222 (RBBP4)
Histone modification proteins
HAT complexes
HATB complex
117868222 (RBBP4)
HDAC complexes
Sin3A-HDAC complex
117868222 (RBBP4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
117868222 (RBBP4)
PRC2.2
117868222 (RBBP4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
117868222 (RBBP4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
117868222 (RBBP4)
Chromatin remodeling factors
NuRD complex
117868222 (RBBP4)
NuRF complex
117868222 (RBBP4)
NuRF complex (fruit fly)
117868222 (RBBP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_1st
WD40_RFWD3
eIF2A
MIOS_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
117868222
NCBI-ProteinID:
XP_034609903
LinkDB
All DBs
Position
20:7050031..7060521
Genome browser
AA seq
471 aa
AA seq
DB search
MARRARGAGAARRGQETIERRLAGTEGGEEPAGRTACTDAMADKEAAFDDAVEERVINEE
YKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLV
IASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCII
ATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDH
IHFFFKTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMI
WDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE
SHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHT
AKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDPEGQGS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgaagggcgcgcggcgctggagccgcacgcagggggcaggaaacaatagagcgg
cggctggcggggacggagggaggcgaggagccggctggccgcaccgcctgcaccgacgcc
atggcggacaaggaggcagcctttgatgatgcggtggaggagcgtgtgatcaatgaggaa
tataaaatttggaaaaagaacactcctttcctgtatgatctggtaatgacccatgctctg
gagtggcccagcctgactgctcagtggcttcctgatgtaacaagacccgaaggcaaagat
ttcagtattcaccgactagtcctggggacccacacttcagatgaacaaaaccatcttgtg
atagccagtgttcagctgcccaatgatgatgcacagtttgatgcttcacactatgatagt
gagaaaggagagtttggaggctttggatctgttagtgggaaaatcgaaattgaaataaag
atcaaccatgaaggagaagtgaacagagcacgctacatgccccaaaatccatgcatcatt
gccacaaagactccatccagcgatgtcctggtctttgactacaccaaacacccctctaaa
ccagacccttctggagagtgtaaccctgatctgcgtcttcgtggacaccaaaaggaaggc
tatggactatcatggaatccaaatctgagtgggcatttgcttagtgcttctgatgatcat
atacactttttctttaagaccatctgcttgtgggatattagtgctgttccgaaggaaggt
aaagtggtggatgcaaagaccatctttacagggcatacagcagtagtggaagatgtatct
tggcacctgctccacgaatctctttttggatctgttgccgatgatcagaagctcatgatt
tgggacacccggtcaaacaacacctccaaacccagtcactctgtggatgctcacacagct
gaagtgaactgcctctctttcaatccctatagtgagtttattctggctacaggatcagct
gataagacggttgctttatgggatctgagaaacctaaaactgaagctgcactcctttgaa
tctcataaagatgaaatatttcaggttcagtggtctcctcataatgaaactattttggcc
tccagtggtactgaccgcaggctaaatgtctgggacttgagtaaaattggagaagaacag
tcccctgaagatgcagaggatggcccaccagagctgttgtttattcatggtggtcacact
gcaaagatatctgatttctcctggaatcccaatgaaccctgggtaatttgttctgtatca
gaagacaatattatgcaagtctggcaaatggctgagaacatatataatgatgaagaccct
gaaggaagtgtggatccagaaggtcaagggtcctag
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