Trachemys scripta elegans (red-eared slider): 117868223
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Entry
117868223 CDS
T07347
Symbol
SYNC
Name
(RefSeq) syncoilin isoform X1
KO
K10377
syncoilin 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tst04812
]
117868223 (SYNC)
Cytoskeleton proteins [BR:
tst04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
117868223 (SYNC)
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Gene cluster
GFIT
Motif
Pfam:
Filament
DUF1664
DUF1192
bZIP_1
Fez1
ATG16
GAS
Motif
Other DBs
NCBI-GeneID:
117868223
NCBI-ProteinID:
XP_034609908
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Position
20:complement(7062109..7074349)
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AA seq
404 aa
AA seq
DB search
MDCSRDSCLSVQVSPWLDREWDLMADSEPPLELHMDDAGTCLELEGDATDALLEPEGAHA
PLELRMDVTNAPLELNNAGAPLEQHVDGADAPLDLDVAVPQTLSIEELGEHFQECIEAVE
QLEEERDSLIQELTLLREPALQEIRQAHEEILAAYRLQSKVELERDNLRNEIRQVKQKLF
KVTRECVACQYQLETRRRDMAQYAVYRAELETRVSQLSEEISQLRETCEKQKEQFRQRLE
MPQYRGDSHYLQESRRLSMEFESFVAESRQGLEKHYEPQLVCLLERREASAKALQQTQGE
IQGLKETLRPLQGEASRLRLQNRNLEEQIRLIKQKRDEEVLQYREQVEEMEERLRELKNE
VQLQQRKNQELEELRTSLHQALSIYKGCLEIYGHLCNSEKVDQD
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggactgctcacgagacagctgcctctctgtgcaagtatccccatggctggaccgggaa
tgggacctgatggcagattcagaaccccctttggagctgcacatggacgatgcaggtaca
tgcttagagctcgagggagatgctacagatgccctgttggagcctgaaggtgcacatgcc
cctttggagctacgtatggatgtcacaaatgcccctctggagctgaacaacgcaggcgca
cccttggagcagcatgtggatggcgcagatgctcccttggacttagatgttgcagtgccc
cagactctgagcattgaggagctgggagagcatttccaggaatgcattgaagcagtggag
cagctggaggaggagagggacagcctcatccaggaactcacgctgctccgggaacctgcc
cttcaagaaatcagacaagctcatgaggagatactggcagcctacagactgcagtccaag
gtggagctggagcgggacaatctgagaaatgagatccgacaagtcaagcagaagctattc
aaggtgaccagagagtgtgtggcttgccagtaccagctggaaaccagacggcgtgacatg
gcccagtatgcggtctatcgggctgaactggaaaccagggtcagccagctttccgaggaa
atatcgcagctgagagagacttgtgaaaagcagaaggaacagttcaggcagcgtctggag
atgccccagtaccggggggatagccattacttgcaggagagccgaaggctttccatggag
tttgagagctttgtggcagagagccgccagggcctggagaaacactatgagccgcagctc
gtgtgccttttagaaaggcgagaagccagtgctaaggctttgcaacaaacacagggagag
attcaggggctgaaggagacactgagaccactgcagggagaggccagcaggctgcggctg
cagaacagaaatctggaagaacagatcaggctcattaagcaaaaacgggacgaagaagtt
ctccagtacagggaacaggtggaagagatggaagagaggctacgggaactgaaaaacgag
gtccaacttcagcaacgtaagaaccaagaattggaagagctgaggaccagcctgcaccag
gcgctatctatttacaagggctgcttagaaatctatggtcatctttgcaactcagaaaaa
gtcgatcaagactga
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