Trachemys scripta elegans (red-eared slider): 117868276
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Entry
117868276 CDS
T07347
Name
(RefSeq) ras-related protein Rab-39B-like
KO
K07925
Ras-related protein Rab-39B
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117868276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117868276
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
tst04031
]
117868276
Membrane trafficking [BR:
tst04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
117868276
GTP-binding proteins [BR:
tst04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
117868276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
RsgA_GTPase
Gtr1_RagA
GTP_EFTU
AAA_24
Motif
Other DBs
NCBI-GeneID:
117868276
NCBI-ProteinID:
XP_034609996
LinkDB
All DBs
Position
20:complement(12276625..12281385)
Genome browser
AA seq
215 aa
AA seq
DB search
MDSLWHYQFRIIMLGDSTVGKSSLLKRYTEGAFLDSINQTVGVDFYVQFVELEPGLRIKL
QFWDTAGQERFRSVTRSYYRNSAGAVLMFDLTNQASFESIKEWHREVTDTVKPFHMVFVL
VGHKSDLVPQRQVERKEAEKLASSLGAKYIETSAKSNSNVDDAFQLLTVEIYEAVKAGML
SPNKDWDGVKSRLPPTEEPKVQNLEKQEKQKKCSC
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggattcgctctggcactaccagttccgcattatcatgctgggggactcgacggtgggg
aagtcgtccctgctgaagcgatacaccgagggcgccttcctcgactccatcaaccagacg
gtgggggtggatttctacgtccagtttgtggagctggagcccgggctccggatcaagctg
cagttctgggacacggctggacaggagcgattcaggtcagtgactcgctcttactaccgc
aactccgctggggcagtgctgatgtttgacctgaccaaccaagcatcctttgagagcatc
aaggagtggcatcgggaggtgacagacacagtgaaaccttttcacatggtctttgtgctg
gttgggcacaagagtgacctggtgccgcagcgccaggttgagcgaaaggaggccgagaag
ctggcttcttcactgggggcaaagtacatagagacatccgctaaaagcaacagcaacgtg
gatgatgccttccagctgctgaccgtggagatctatgaagctgtgaaggctgggatgctg
agcccaaacaaggattgggatggggtgaaaagcagactgccacccacagaggagcccaaa
gtacagaacctggaaaaacaagagaagcagaagaagtgctcgtgctag
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integrated database retrieval system
