Trachemys scripta elegans (red-eared slider): 117868284
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Entry
117868284 CDS
T07347
Symbol
GRIK3
Name
(RefSeq) glutamate receptor ionotropic, kainate 3 isoform X1
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04080
Neuroactive ligand-receptor interaction
tst04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117868284 (GRIK3)
04082 Neuroactive ligand signaling
117868284 (GRIK3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tst04040
]
117868284 (GRIK3)
Ion channels [BR:
tst04040
]
Ligand-gated channels
Glutamate (ionotropic)
117868284 (GRIK3)
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
117868284
NCBI-ProteinID:
XP_034610006
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Position
20:1987133..2212962
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AA seq
919 aa
AA seq
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MPHFWLALRSVLVEYWVGLLVGSFWMQSSHGMPHVIRIGGIFEYADGPNAQVMSAEEQAF
RFSANIINRNRTLLPNTTLTYDIQRIHFHDSFEATKKACDQLALGVVAIFGPSQGSCTNA
VQSICNALEVPHIQLRWKHHPLDNKDTFYVNLYPDYASLSQAILDLVQYLKWRSATVVYD
DSTGLIRLQELIMAPSRYNIRLKIRQLPIDTEDARPLLKEMKRGREFRIIFDCNHLMAAQ
ILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVNLTGFRILNVENPHVSAITEKWS
MERLQAAPRAESGLLDGVMMTDAALLYDAVHIVSVCYQRAPQMTVNSLQCHRHKAWRFGG
RFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWNPSDGLNITEIS
KGRGPNVTDSLTNRSLIVTTVLEEPFVMFRKSDTALFGNDRFEGYCIDLLKELSHILGFT
YDIRLVEDGKYGAQDEKGQWNGMMKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGV
SILYRKPNGTNPSVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYDAHPCNPG
SDIVENNFTLLNSFWFGMGALMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAF
LIVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVK
NNEEGIQRALTAEYALLMESTTIEYITQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKIT
IAILQLQEEDKLHIMKEKWWRGNGCPEEESKEASALGIQNIGGIFIVLAAGLVLSVFVAM
IEFVYKLRKTAEREQRSFCSAMADEIRLSLTCQRRVKHKAQPPIMVKTDAVINMHTFNDR
RLPGKDSMTCNTGLTPVFP
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgccccatttctggctcgctctgcggagtgtgcttgtggaatactgggtcgggctcctg
gtgggcagtttttggatgcagtcttcgcatgggatgccccatgtcatccggataggagga
attttcgagtatgcagatggccccaacgcccaggttatgagtgccgaggagcaagccttt
agattttctgccaatattatcaatagaaatagaactttgttgcctaacacaacattaacc
tatgacattcagaggatacacttccacgacagctttgaagccactaagaaagcctgtgac
cagctcgccctgggggttgtagcaatattcgggccttctcaaggctcctgcaccaatgct
gttcagtctatttgcaatgcactggaagtcccccatatacaacttcggtggaagcatcac
cctttggataacaaggacactttctatgtcaacctttaccccgactatgcttctctcagc
caggccattctggaccttgtacagtatttgaaatggaggtcagctaccgttgtttatgat
gacagtacaggcctgatacggctgcaggagcttatcatggccccatcaaggtacaacatc
cggctgaagatccgccagctgcccatcgacacggaggatgccaggcccctgctgaaggag
atgaagagaggccgggaattccgcatcatcttcgactgcaaccacttgatggcagctcag
attctcaaacaggctatggcaatgggaatgatgacggaatactaccacttcatcttcact
actctggatctttatgcactagacctagagccataccgctactctggagtgaacctgact
ggcttccggatcctcaacgtggagaaccctcacgtgtctgccatcactgagaaatggtcc
atggagcggctgcaggccgcgcccagggcggagtcgggcctgctcgacggggtcatgatg
acagatgctgccctgttgtacgacgcagttcacatcgtctcagtgtgctaccagcgagcc
ccacagatgactgttaactccctgcagtgccatcgacacaaagcctggaggttcgggggc
cgctttatgaattttataaaagaggcccaatgggaaggattaactgggcgtattgtcttc
aacaaaaccagtggattaaggacagattttgacttggacatcatcagcctcaaagaagat
ggtctcgaaaaggttggagtgtggaacccttctgatggtttgaacatcacggaaatttcc
aaggggcgaggacccaacgtcacagactcactaaccaacagatctcttattgtcaccact
gtcctggaagagcccttcgtcatgtttcggaagtcagacacagccctcttcgggaacgac
cgctttgaaggttactgcattgaccttctgaaggagctatcacacatcctgggctttacc
tatgatatccggctggtggaggacgggaagtatggcgcacaggatgagaaggggcagtgg
aatggcatgatgaaggaactcattgaccataaagctgatctggccgttgctcctctcacg
atcacccacgtccgggagaaagcgatagacttctccaagcctttcatgacattgggggtc
agcattctgtaccggaagcccaacgggaccaatcccagtgtgttttccttcctcaacccc
ttgtctcctgacatttggatgtacattctcctcgcctacttgggggtcagctgtgtgctg
tttgtcatagccaggttcagcccgtacgagtggtatgacgctcacccctgcaacccgggc
tcagacatcgtggagaataacttcaccctgctcaacagcttctggtttggaatgggagca
ctaatgcagcaagggtctgagctgatgcccaaagctctgtctacacggatcattggcggc
atctggtggttcttcacgctcatcatcatctcgtcctacacagccaaccttgctgccttc
ctgattgtggagagaatggaatcccccatcgactcggcagatgatctggcaaagcaaaca
aaaatagagtatggagctgtgaaggatggagctaccatgaccttcttcaagaaatccaaa
atttccaccttcgaaaagatgtgggcgttcatgagcagcaagccatcagcactcgttaaa
aataacgaggaaggaatccagcgagccctcactgcagaatacgccctcctaatggagtcc
accactattgaatatatcacacaaaggaactgcaacctaacccagattggggggctgatt
gactccaaaggctatgggattggaactcccatgggttcaccgtaccgggataagatcacc
atcgctatcctccagctccaagaggaagacaagctgcacataatgaaagagaaatggtgg
cgggggaatggctgccctgaggaggagagcaaagaggccagcgcactggggatacagaac
attggtgggattttcattgtcctagcagcaggcttggtgctgtcggtcttcgtggcgatg
atcgagttcgtctacaagctgcgcaaaacagcggagcgtgagcagcgctccttctgcagt
gccatggccgacgagatccggctgtcgctcacctgccagcggagggtcaaacacaaagcc
cagccacccatcatggtgaagacggacgctgtgatcaacatgcacacgttcaacgaccga
cggctaccagggaaggacagcatgacgtgcaatactgggctgacgcccgtatttccatag
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