Trachemys scripta elegans (red-eared slider): 117868296
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Entry
117868296 CDS
T07347
Symbol
RPA2
Name
(RefSeq) replication protein A 32 kDa subunit isoform X1
KO
K10739
replication factor A2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03030
DNA replication
tst03420
Nucleotide excision repair
tst03430
Mismatch repair
tst03440
Homologous recombination
tst03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117868296 (RPA2)
03420 Nucleotide excision repair
117868296 (RPA2)
03430 Mismatch repair
117868296 (RPA2)
03440 Homologous recombination
117868296 (RPA2)
03460 Fanconi anemia pathway
117868296 (RPA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tst03032
]
117868296 (RPA2)
03400 DNA repair and recombination proteins [BR:
tst03400
]
117868296 (RPA2)
DNA replication proteins [BR:
tst03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
117868296 (RPA2)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
117868296 (RPA2)
MMR (mismatch excision repair)
117868296 (RPA2)
DSBR (double strand breaks repair)
HR (homologous recombination)
117868296 (RPA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
RMI2
TBD
Motif
Other DBs
NCBI-GeneID:
117868296
NCBI-ProteinID:
XP_034610025
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All DBs
Position
20:complement(18220637..18235439)
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AA seq
272 aa
AA seq
DB search
MMWSSHGGFESGYGGSAISGGYTQSPGGFGSPAATQGEKKQRSRSQSIVPCTVSQLLAAE
QIDETFKIREVEISQVVIMGIIRQAEKAPTNILYKIDDMTAAPMDVRQWVDTDEAGSENV
VVPPGTYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHLLEIVNAHMVLRKSIMTTSK
MPQSLGSFGMGDMASYGCGSSVPVNGLTAHQSQVLNLIKSCSDPEGLSLTELKSQLHNIN
MITIKQAVEFLSSEGHIYSTVDDDHYKSTDAE
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggagcagtcacggtggctttgagagtggctatggagggtctgcaattagtgga
ggatacacacagtccccaggggggtttggatctcctgcagccacccagggagaaaagaaa
cagagatcccgctcccagagtattgtgccatgtacagtgtctcagttacttgctgctgag
cagattgatgagacgttcaagatccgagaagtagagatctcgcaggttgttatcatggga
ataatcagacaggcagagaaagcaccaaccaacatcctctacaaaatagatgatatgact
gcagccccgatggatgtcagacagtgggttgatactgatgaggcagggagtgagaatgtt
gtggtgcccccaggaacttacgtgaaagtggctggtcatcttcgatcgttccagaataag
aagagcctggtagcatttaagatcatgcctctggaagatatgaatgagttcaccacacac
ttattggaaattgtcaacgcacatatggtcctcagaaaaagcatcatgacaacatcaaaa
atgcctcagtctctgggctcctttgggatgggtgatatggcaagctatggatgtggcagt
agtgtgccagtgaatggacttacagcacatcagagtcaggtgttaaatttgattaaaagc
tgctctgatccagaaggcttgagcctgacggagctgaaatcccaactacataacatcaat
atgataacaatcaagcaagcggttgaatttcttagcagtgagggacacatctattccact
gtggatgacgatcactataaatctacagatgctgaataa
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integrated database retrieval system
