Trachemys scripta elegans (red-eared slider): 117868310
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Entry
117868310 CDS
T07347
Name
(RefSeq) protein argonaute-3 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117868310
03036 Chromosome and associated proteins [BR:
tst03036
]
117868310
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117868310
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
117868310
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
117868310
microRNA pathway
RISC loading complex
117868310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoMid
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
117868310
NCBI-ProteinID:
XP_034610059
LinkDB
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Position
20:complement(3313788..3370155)
Genome browser
AA seq
894 aa
AA seq
DB search
MEIGSAGPVGAQPLLMVPRRPGYGTMGKPIKLLANCFQVEIPKIDVYLYEVDIKPDKCPR
RVNREVVDSMVQHFKVTIFGDRRPVYDGKRSLYTANPLPVATTGVDLDVTLPGEGGKDRP
FKVSIKFVSRVSWHLLHEVLTGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGR
SFFSAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLD
IHNIDEQPRPLTDSHRVKFTKEIKECSMSNCTVSSCHSTSPTHLSHCNRNSHCKKTLQGL
KVEVTHCGTMRRKYRVCNVTRRPASHQTFPLQLENGQTVERTVAQYFREKYNLQLKYPHL
PCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLVRS
ANYDADPFVQEFQFKVRDEMAHVTGRVLPAPMLQYGGRNRTVATPSHGVWDMRGKQFHTG
VEIKMWAIACFATQRQCREEILKGFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMF
RHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVIKTSPQTLSNLCL
KINVKLGGINNILVPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRY
CATVRVQRPRQEIIQDLASMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFRQVLYYELL
AIREACISLEKDYQPGITYIVVQKRHHTRLFCADRTERVGRSGNIPAGTTVDTDITHPYE
FDFYLCSHAGIQGTSRPSHYHVLWDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYY
AHLVAFRARYHLVDKEHDSAEGSHVSGQSNGRDPQALAKAVQIHQDTLRTMYFA
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcggcagcgcaggacccgtcggggcacagccccttcttatggtgcccagacgt
cccggctatggcaccatgggcaaacctattaaattgctggccaactgcttccaagttgaa
atcccaaagattgatgtctacctctatgaggtggatattaaaccagataagtgtcctcgc
agggtgaacagggaggtggtggactccatggtgcagcattttaaagtgacaatatttggg
gaccgtagaccagtttatgatgggaagagaagcctttatacagccaatccactccctgta
gcaaccactggggtagatttggatgtaacattaccaggagaaggtggaaaagatcgtccc
ttcaaggtgtcaataaagtttgtttctcgggtgagctggcacttgctgcatgaagttttg
acaggaagaaccttgcctgagcctctggaactagacaaaccaatcagcactaaccctgtt
catgctgtcgatgtggtgctacgacacctaccctccatgaagtatacccctgtgggccgc
tcctttttctcagctccagagggctatgatcaccctttgggagggggcagggaagtatgg
tttggattccatcagtctgttcggcctgccatgtggaaaatgatgcttaatattgatgtt
tctgccactgccttctacaaagcacaacctgtaattcagttcatgtgtgaagttctcgac
attcataacattgatgaacaaccgagacctctgactgattctcatcgggtaaaattcacc
aaagagataaaggaatgcagcatgtctaactgtacagtgagcagctgtcactctacttca
ccaacacatctcagtcattgtaatagaaatagccactgtaagaaaacactgcaaggtctg
aaggttgaagtgactcactgtggaacaatgagacggaaataccgtgtttgtaatgtaaca
aggagacctgccagtcatcaaaccttccctttacagttagaaaacggccagacagttgag
agaacagtagcacagtacttcagagagaagtataacctccagctgaaatatcctcatctt
ccttgtctacaagtgggacaggagcagaaacatacctacctgcctctagaagtatgtaac
attgtggcaggccagcgatgtatcaagaagctaacagacaatcagacatcaactatgata
aaagcaacagcaagatctgccccagatagacaagaggaaattagcagattggtaagaagt
gcaaattatgatgcggatccatttgttcaagagtttcagtttaaagttcgtgatgagatg
gcccatgtgacggggcgtgtgcttccagctccaatgttgcagtatggaggacggaatcga
acagtggcaaccccaagccatggcgtatgggatatgcgagggaaacagtttcacactggt
gttgagatcaaaatgtgggccatagcttgctttgcaacgcagagacaatgcagagaagaa
atactgaagggttttacagatcagctgcgcaagatttcgaaggatgcagggatgcccatc
caaggccagccatgtttttgcaaatatgcacagggtgcagacagcgtggagccaatgttc
cgacaccttaaaaacacctattcaggactccagctcatcattgtcatcctgccagggaaa
acacctgtgtatgcggaggtgaaacgtgtgggagatacgctgttggggatggccacgcag
tgcgttcaagtcaagaatgtcataaaaacatctcctcagactctctcaaacctgtgccta
aagattaatgttaaattaggaggaatcaacaacattcttgtacctcatcaacgaccttct
gtgttccaacaaccagtgatcttcttgggagcagatgtcactcatccacctgctggggat
ggaaagaagccttccattgctgctgttgtaggtagtatggatgctcatccaagcaggtat
tgtgccacagtgagagttcaaaggcctcggcaggagattatccaagatttggcctccatg
gtaagagaactcctcatccagttctacaaatcaacgcgattcaaacccacacgtatcatc
ttctacagggatggggtttctgaaggacagtttcgacaggtgttgtattatgagctgcta
gcaattagagaggcctgcatcagtctggagaaagattaccagccaggaataacctacatc
gtagtacagaaacgacaccacacacgattgttctgtgcggacagaactgaaagggttgga
agaagtggcaacattccagctggaacaactgtagatacagatattacacacccatacgag
tttgatttttacctctgtagccatgctggaatacagggtaccagccgtccctcacactat
catgttttgtgggatgataactgttttactgcagatgaacttcagctgctgacttaccag
ctatgccacacatatgtgcgttgcacacgatctgtttctatacctgcaccagcgtattat
gctcacctggtagcattcagagcacgataccatcttgtggacaaagaacatgacagtgct
gaaggaagccatgtttcaggacaaagcaatgggagagacccacaggcccttgctaaggct
gtacagattcaccaagacaccttacgcaccatgtacttcgcttaa
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