Trachemys scripta elegans (red-eared slider): 117868363
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Entry
117868363 CDS
T07347
Symbol
SYF2
Name
(RefSeq) pre-mRNA-splicing factor SYF2
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117868363 (SYF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tst03041
]
117868363 (SYF2)
Spliceosome [BR:
tst03041
]
Complex B
Other components
Prp19-related factors
117868363 (SYF2)
Complex C
117868363 (SYF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
Motif
Other DBs
NCBI-GeneID:
117868363
NCBI-ProteinID:
XP_034610139
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All DBs
Position
20:9101523..9106141
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AA seq
248 aa
AA seq
DB search
MAAEGDGAPHGGASSASSDEESAPTAAEELAAQKREERLRKFRELHMKRNEARKLNHQEV
VEEDKRLKLPANWEAKKARLEWELKVEEKKKECASKGEDYERVKLLEISAEDAERWERKK
KRKNPDLGFSDYAAAQLRQYQRLTKQIKPDMEKYEKLREENGEELYPTANSLLHGTHVPC
KEGVDRMVTDLEKQIEKREKYSRRRAYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQ
NLERGTAV
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagggggatggagccccgcacggaggggcctcttctgccagctccgacgaa
gaatctgcgcccactgcggctgaggagttggctgcccagaagagggaggagaggttgagg
aagttcagagagctccatatgaaaaggaatgaagctcgcaagctaaatcaccaggaagtt
gtggaagaagataaaagacttaagttgcctgcaaactgggaagcaaaaaaggctcgactg
gaatgggaactgaaggttgaggaaaagaagaaggaatgtgcctctaaaggagaagattac
gagcgggtgaagttgttagaaatcagtgctgaggatgcagaaagatgggaaaggaaaaag
aagagaaaaaatccagacctagggttttcagattatgcagctgctcagttgcgccagtat
cagaggttaaccaagcagatcaaacctgacatggaaaaatacgaaaagctaagagaagaa
aatggagaagaattgtatccaacagcaaacagtcttcttcatggaactcatgtaccatgt
aaagaaggggttgatagaatggttacagatcttgaaaaacaaattgaaaaacgtgaaaaa
tacagtcgacgacgtgcttataatgatgatgcggatattgattacattaatgagagaaat
gccaaattcaataagaaagcagaaaggttctatgggaaatatacagcagaaattaaacag
aacttggagagaggaacagctgtctaa
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integrated database retrieval system
