Trachemys scripta elegans (red-eared slider): 117868380
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Entry
117868380 CDS
T07347
Name
(RefSeq) elongation factor 1-alpha, somatic form-like
KO
K03231
elongation factor 1-alpha
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117868380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117868380
03016 Transfer RNA biogenesis [BR:
tst03016
]
117868380
03012 Translation factors [BR:
tst03012
]
117868380
04131 Membrane trafficking [BR:
tst04131
]
117868380
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tst04147
]
117868380
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117868380
Transfer RNA biogenesis [BR:
tst03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
117868380
Translation factors [BR:
tst03012
]
Eukaryotic type
Elongation factors
117868380
Membrane trafficking [BR:
tst04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
117868380
Exosome [BR:
tst04147
]
Exosomal proteins
Proteins found in most exosomes
117868380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
117868380
NCBI-ProteinID:
XP_034610167
LinkDB
All DBs
Position
20:complement(8056334..8060287)
Genome browser
AA seq
514 aa
AA seq
DB search
MCLAAGRVLLCLPPCDAGLLLRSHTGAARRESLCGNSAPGVCPAGHARAPTGTMGKEKTH
INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAER
ERGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGI
SKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSGKRYQEITKEVSTYIKKIGYNPAS
VAFVPISGWHGDNMLEASANMPWFKGWSITRKEGNVSGTTLLEALDSIIPPSRPINKPLR
LPLQDVYKIGGIGTVPVGRVETGFMKAGMVVTFAPANVTTEVKSVEMHHEALAEALPGDN
VGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGSFTSQVIILNHPGQIATGYSPVLDCHTAH
IACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVQMIPGKPMCVESFSEYPPLGRFAVR
DMRQTVAVGVIKAVEKKAGGTAKVTKSAVKASKK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttggctgcagggcgtgttctgctgtgtttgcccccgtgtgacgctggcttgtta
ctccggagtcacaccggagcggctcggcgtgaatcgctctgcggtaactctgccccgggg
gtctgtcctgcaggtcacgctcgcgctcccaccggcaccatgggcaaggagaaaacccac
atcaacatcgtggtgatcggccacgtggactcggggaaatccaccaccaccgggcacctc
atctacaagtgcgggggcatcgacaagcgaaccatcgagaagttcgagaaggaggcggcc
gagatggggaagggctccttcaaatacgcctgggtgctggataaactgaaggccgagcgg
gagcgtgggatcaccattgacatctccctgtggaagtttgagaccaccaagtactacatc
accatcatcgatgcccctggccaccgagacttcatcaagaacatgatcaccggcacctcg
caggctgactgtgcggtgctgattgtggcggccggtgttggagagtttgaagctggcatc
tctaagaacgggcagacccgggagcatgccctgctggcctacacgctgggggtgaagcag
ctcatcgttggggtgaacaagatggactccacagagcccccttacagcggcaagcgctac
caggagatcaccaaggaagtgagcacctacatcaagaagatcggctacaacccagcctct
gtggcattcgtgcccatctctggctggcatggggacaacatgctggaggccagcgccaat
atgccttggttcaaaggctggagcattacgaggaaggaaggcaacgtttctggtacaaca
ctgctggaagccctggattccattatccctccttcccgccccatcaacaaacccctccgc
ctgcccctgcaggatgtctacaagattggcggtattggaacggtcccagtgggccgtgtg
gagactggcttcatgaaggccggcatggttgtgacttttgcccccgccaacgtcaccacg
gaggtgaagtcagtagaaatgcaccatgaggctctggcagaggcactgccgggtgacaac
gttgggttcaacgtgaagaacgtgtctgtgaaagacatccggcgtgggaacgtggccgga
gacagcaagaacgaccctcccatggaggccggcagcttcacctctcaggtcatcatcctg
aaccaccctggccagatagccactggctactccccagtgctggattgccacactgctcac
atcgcctgcaagtttgcggagctgaaggagaagatcgaccgcaggtctggcaagaagctg
gaggacaatcccaaggcactgaagtctggggatgctgccattgtgcagatgattcctggc
aaacccatgtgtgtggagagcttctcggagtacccacctcttggtcgctttgctgttcgt
gacatgaggcagacggtggctgtgggggtgatcaaggctgttgagaagaaggctggtgga
actgccaaggtcaccaagtcagcagtgaaggccagtaagaagtga
DBGET
integrated database retrieval system
