Trachemys scripta elegans (red-eared slider): 117868477
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Entry
117868477 CDS
T07347
Symbol
GRIK4
Name
(RefSeq) glutamate receptor ionotropic, kainate 4 isoform X1
KO
K05204
glutamate receptor, ionotropic kainate 4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04080
Neuroactive ligand-receptor interaction
tst04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117868477 (GRIK4)
04082 Neuroactive ligand signaling
117868477 (GRIK4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tst04040
]
117868477 (GRIK4)
Ion channels [BR:
tst04040
]
Ligand-gated channels
Glutamate (ionotropic)
117868477 (GRIK4)
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Ortholog
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
117868477
NCBI-ProteinID:
XP_034610307
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All DBs
Position
21:complement(11384863..11700155)
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AA seq
959 aa
AA seq
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MPRVLAPLVLLLVWLMKIAASPHSLRIAAILDDPMECSRGERLSITLAKNRINRAPERAG
KAKVEVDIFELLRDSEYETAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFK
VAPEEFLKFQFQRFTTLNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLLR
QFLISKDTLSVRMLDDSRDPTPLLKEIRDDKTATIIVHANASMSHIILQKAAELGMASAY
YTYIFTNLEFSLQQLDSFLDDRVNILGFSTFNQSHAFFQEFVQSLNLSWQENCDHAPFTG
PALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLT
GHIEFNSKGQRSNYALKILQYTRRGFRQIGHWHVSEGLTMDNRIFSSNISDTLFNTTLII
TTILENPYLMLKENQQALEGNDRYEGFCVDMLKELAEILHFNYKIRLVGDGVYGVPEANG
TWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFL
DPFSPGVWLFMLLAYLAVSCVLFLVARLTPYEWYSPHPCSQGRCNLLVNQYSLGNSLWFP
VGGFMQQGSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLA
DQTAIEYGTIHGGSSMTFFQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSNYAF
LLESTMNEYYRQRNCNLTQVGGLLDTKGYGIGMPVGSIFRDEFDLAILQLQENNRLEILK
RKWWEGGKCPKEEDHRAKGLGMENIGGIFVVLICGLIVAIFMAMLEFLWSVRHSEQTEVS
VCQEMVTELRSIILCKDSFHPRRRRAGMIRTRPIIAEERRPRSTTTLSNGKLCGGGEPDP
LAQRLAQEAALVARGCTHIRVCPECRRFQGLRARPAPGSPAQSEESLEWEKATNSSEPE
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgccccgggtcttggcgcctctggtgctccttctggtgtggctaatgaagatcgccgcc
agcccccactccctgaggatcgccgccattttggatgacccgatggagtgcagcagaggg
gagaggctgtccattactctagcgaagaatcgtattaaccgtgcaccagagcgagcggga
aaagccaaagtggaggtggacatttttgagctgctgagagacagcgaatatgagacagct
gaaaccatgtgccagattcttccgaaaggggtggtagccgtcctgggaccttcatcgagt
ccggcctcaagctctattatcagcaacatctgcggggagaaagaggtccctcatttcaaa
gttgccccagaggaattcctcaagttccagttccagcgattcaccaccttgaacctccac
cccagcaacaccgacatcagcgtggccgtagctgggatcctgaacttctttaactgcacc
actgcctgcctcatctgtgccaaagcggaatgccttttaaacctagagaagttacttcgt
cagttccttatctcgaaggacaccctctcggtccggatgctggatgacagccgggaccct
accccactcctaaaagaaatcagagacgacaaaactgccaccatcattgtccatgcgaat
gcctccatgtcccacatcatcctccagaaggcagctgaactgggaatggcgtcagcctat
tacacgtatatcttcactaacctggagttctcgctccagcaattggacagctttctggat
gaccgggttaacatcctgggattttccaccttcaaccagtctcatgctttcttccaagag
tttgtccagagcctcaacctgtcgtggcaggagaactgtgatcacgctccctttactggg
ccggccctctcctctgccttgttgtttgatgccgtttatgccgtggtgacagcagtgcag
gagctaaaccggagccaggagattggtgtgaaaccactgtcctgtggatccgcacagatc
tggcaacatggcaccagcttgatgaactacctgagaatggtagaattggaaggtctcacc
ggccacatcgaattcaacagcaaaggtcagcggtcgaactacgccctgaaaatcctgcag
tacacacgacgtggcttcagacagattggccactggcatgtttctgaaggacttaccatg
gacaacagaatcttctcctccaacatatcggatactctcttcaacaccactctcatcatc
accaccatcctggaaaacccttatttaatgctgaaggagaaccagcaggcgctggagggg
aatgaccgctatgaaggcttctgcgtagacatgttgaaggagctggcagagatcctgcac
ttcaactacaagatccgcctggttggtgacggggtgtatggtgtgcccgaggcgaacggc
acctggactggaatggtcggagagctcattgctcggaaagccgatttggcagtggctggc
ctgacaatcacggctgaacgggagaaggtgattgatttctctaaacctttcatgactttg
ggaattagcattctctaccgagttcatatggggcgcaaacctggctacttctctttcctg
gaccccttttctcctggtgtctggctcttcatgttacttgcctacctggctgtcagctgt
gtcctcttcctggttgctcgactgacgccatacgagtggtacagcccccacccctgctcg
caagggaggtgcaatctcctagtgaaccagtactctctcggcaacagcctgtggtttcca
gtcgggggtttcatgcagcaaggatctactattgcccctcgagctctgtccacacggtgc
gtcagtggagtctggtgggcattcaccttgatcatcatctcctcctacacggccaacctg
gcagcctttctgaccgtgcagcggatggatgtgcccatagaatcggtggatgacctggcc
gaccagacagctattgagtatggcaccattcacggaggctccagcatgacctttttccag
aattcccgttaccagacgtaccagcggatgtggaattacatgtactccaagcagccaagc
gtgttcgtgaagagcacggaggaagggatcgcaagggtgctgaattccaattacgctttc
ctgctggagtccaccatgaacgagtattaccgtcagcgcaattgcaacctcacgcaggtc
gggggccttctggacaccaagggctacgggattggcatgccagtcggctccatattccga
gatgaattcgacctggccattctccagctgcaagagaacaaccgcctggaaatcttgaag
cgaaagtggtgggaagggggcaagtgccccaaagaggaagaccacagagccaaaggtctg
ggaatggagaatattggtggaatcttcgtggttctcatatgtggcttaatcgtagcaatt
tttatggcaatgctggaatttttgtggagcgtacgacactctgaacagacagaggtgtct
gtctgccaggagatggtgacagagctgcgcagtatcatcctctgcaaagacagtttccac
cctcggcgaaggcgagcggggatgatacggactcggcccattattgccgaggaacgtcga
ccccgcagtacaaccactctcagcaacgggaaactatgcggcggcggtgagccagacccg
ctggcgcaaagacttgcacaagaagctgctctggttgcccgaggctgcacgcacattcgg
gtgtgcccggagtgtcggaggttccagggcctccgggcgcggccagctccgggttcacct
gcacaaagcgaagagagcttggaatgggagaaagccaccaacagcagcgaacctgagtag
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