Trachemys scripta elegans (red-eared slider): 117868506
Help
Entry
117868506 CDS
T07347
Symbol
CDON
Name
(RefSeq) cell adhesion molecule-related/down-regulated by oncogenes isoform X1
KO
K20033
cell adhesion molecule-related/down-regulated by oncogenes
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117868506 (CDON)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
Tissue_fac
V-set_CD47
DUF7359
Motif
Other DBs
NCBI-GeneID:
117868506
NCBI-ProteinID:
XP_034610378
LinkDB
All DBs
Position
21:complement(2642469..2736381)
Genome browser
AA seq
1260 aa
AA seq
DB search
MHPDPRPLQALLFITAAVIFSATSSDLIPHFISEPLSTIQKPGGPVKLHCSAEPSTARIS
WLFNGQRLDSRVEQVEVQLGSLTIFSLSPSNSGHYQCIANYSAGAIVSRPATVSIGHLDD
FDTSVKHIVTAEEGSAAFIGCKVPESNPKAQVRFRVRGKWLEQSTDNYLILPSGNLQILN
VSLEDKGSYKCAAYNPVTHDLKLEPTGHKLIVSRTSAEGFRILHPTVSLALAVPQHSPLT
LECVVSGLPASHVHWFKDGQDALTGSRWRLLHSHLVTDRLDTLDAGNYSCVVANQSGVVK
YINYTVTILESASISKGLQDQTVAVGATIHFTCDIHGNPAPNLTWFHNAAPIHLSPRHLV
TGNRLRISGITKEDSGLYQCVANNGIGFMQSTGRLQVQTGKGYKPVIVSSPASANVVDGG
DVTLSCNATGLPIPVIRWYNSRGLITSHPSQVLHSKPRKSPQARRGSMILEPIYFTMSRA
GSSSLYIQAVTPEHAGKYSCEATNKHGSALSEAFLTVVPFESSTKAEEVTPTEVAQSDEG
DGDYDTEVGFSNLSPTKLHLDAVATEKTPNGALPPEAPIILSPPQTLKPDMYNLVWRSGK
DGGLPINAYFVKYRKLDDGVNAMGSWHTVRVPGSENELHLTELEPSSLYEVLMVARSAAG
EGQPAMLTFRTSKERTSSSKNTQAPSPPLGIPKHPVIQEGSNNFGVVLPDLSRHSGVPEA
PDRPAISTASETSVYVTWIPRANGGSPITAFKVEYKRMSRNSDWLIAANSISPSNLSVEV
RNLEPGATYKFRVIAVNNYGDSPRSSPSRPYQVAGFTNRFSNRPITGPHIAYTEAVSDTQ
IMLKWTYITSSNNNTPIQGFYIYYRPTDSDNDSDYKREIVEGTKQWHLISHLQPETSYDI
KMQCYNEGGESEYSNVMMCETKVKRTPGASEYPVKDLSTPPNSPDRAGGGNAGPSNGPVR
SSDMLYLIVGCVLGVMVLILIVFIAMCLWKNRQQNAMQKYDPPGYLYQGADINGQMVEYA
TLPGTSRINGSIHGNFISNGSLSNGCPHLHHKVPNGVNGIMNGGLNGGTGLYLGHTNSLS
RTHMDYEHPHHLVNGGGMYTAVPQTDPSECINCRNCRNNNRCFTKTNGTFSSNTLPVVPI
VAPYQQDSLEMKPMNHVMVAMCLASTVPECSVELEEDSKEKVEQPSTQHSCCQENMNQIN
IDYPEGDICARSETSNHILSWSPLILQPVSKDCNEKSGWNSPGVTLNSSGDLRQLQMQET
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgcatccggatcccagacccttacaggcactgctcttcatcactgctgcagttatcttc
tccgctacaagttcagatttgattcctcattttatttctgagcccctgtccactatccag
aagcctggtgggcctgtaaagcttcattgctctgctgaaccctccacagctcgcatttct
tggctgtttaacggacaaaggttggacagcagggtggagcaagtggaggtgcagctagga
tctttgacaatcttctctctcagcccctcaaattctggtcactatcagtgcattgccaat
tacagtgctggtgcaattgtgagcaggcctgctacagtatccataggccatcttgatgat
tttgatacttcagtgaaacacatagttacagcagaagaaggaagtgctgccttcattggc
tgtaaggtaccagaaagtaaccctaaagcacaagttcgctttcgagtacggggaaaatgg
ctggaacaatcaacagataactacctaattcttccatctggaaatctgcagattttgaat
gtctctttagaggataaaggctcctataaatgtgcagcatacaacccagtcactcatgat
ctcaaattagaacccactggacataagctcatagtcagccgcacttctgcagaaggtttt
cgcattcttcaccccaccgtttctctggctttggcggtacctcagcacagtcccctaact
ctagagtgtgttgtcagtgggttgcctgcatctcatgtccactggtttaaggatggtcag
gatgcactgactggaagcaggtggagactactgcactcccatcttgtgacggacaggctt
gatacattggatgctggaaactactcctgtgtggtggcaaatcagtctggagtagtgaaa
tatataaattacacagtaactattcttgaatctgcctcaatttctaaaggactgcaggat
caaacagtggctgtgggtgcaactatacatttcacatgtgacattcatggaaaccctgct
cctaatcttacctggttccataatgcagctcccatccatctctctccacgacatctggtc
acaggaaacaggttgagaatcagtggcatcaccaaggaggattctgggttgtaccagtgt
gtggcaaacaatgggattggctttatgcaatccactgggagacttcaagtccagacaggc
aaaggttacaagccagttatagtttcttcaccagccagtgccaatgtggtagatggtggt
gatgttacattgtcatgcaacgccactggactacctattcctgtaatccgttggtacaac
agccgtggacttattaccagccacccttctcaggtcctacattcaaaaccacgaaaatct
ccacaagcaagaagaggcagcatgattttagaacccatctacttcaccatgtctcgagct
ggatcaagctccctatacattcaggcagttactccagagcatgctgggaaatactcttgt
gaagcaacaaataaacatggctcagcactgtcagaagcatttcttacagttgttcctttt
gaatctagtacaaaagctgaagaagtcactcctacggaggttgcccaaagtgatgaaggt
gatggagattatgatacagaagtggggttctcaaatttgtctccgacaaagttgcatctt
gatgcagttgctacagaaaagacacccaatggggctttgcctcctgaagccccaatcatc
ctcagccctccacagacactcaagccagacatgtataacctggtgtggcgctctggaaag
gatggcggcttgcccatcaatgcttacttcgtgaaatatcgcaagctggatgatggcgtc
aatgccatgggaagctggcatacagttcgtgttcctggaagtgaaaatgagcttcatctc
acagaactggagccctccagcctctatgaagttctgatggtagcaaggagtgctgctggt
gaaggccagcctgccatgcttacatttcgcaccagcaaagaaagaacatcatcctcaaaa
aacactcaggccccatctcccccacttggcattcctaaacatcccgtcattcaggaaggg
tcaaataactttggggtggtccttccagatctatctcgacacagtggagttccagaggct
ccagatcgccctgctatctcaacagcttcagagacctctgtctatgtcacatggatccca
cgtgcaaatggtggctctcccatcactgcctttaaagtcgagtacaagcgcatgagccga
aacagcgactggctaattgcagccaatagcatctctccttctaacctgtcagtggaagtt
cgcaacttagagccaggagcaacatacaaattccgtgtgattgccgttaacaattatggg
gatagtccacgaagctcaccatctcggccatatcaagtcgctggctttaccaaccgtttt
tccaaccgcccgatcacaggacctcacattgcctacactgaggcagtcagcgacactcag
atcatgttaaaatggacttatattacttcaagcaacaacaatacccccatccaaggattt
tatatctattaccggccaactgacagtgacaatgatagtgattacaagagagagattgtg
gaaggcacaaagcagtggcacttgataagccacctgcagccagaaacatcttacgatatt
aaaatgcagtgctataacgagggaggtgaaagtgagtacagcaacgtaatgatgtgcgag
acgaaagtgaaacgcacacctggagcatcggaatatccagtgaaggatctgagtacacca
cctaattctcctgatcgtgccggtggaggcaatgctggcccatcaaatggccctgttcgg
agcagcgacatgctatatctgattgtgggctgtgtccttggagtgatggtccttattctg
atagttttcattgccatgtgtctgtggaagaatcgccagcaaaacgccatgcagaagtat
gaccctcctggttacctctaccaaggtgcagatatcaatgggcaaatggtcgaatacgct
actttaccaggcacaagccgcatcaacggcagcatacatggaaacttcatcagcaatggt
agtctcagtaacggctgtccacacctccatcacaaggttcccaatggagttaatgggatc
atgaatggtggcttgaatggagggactggcctttacctgggacacaccaactctctatcc
aggacacacatggattatgaacatccccaccatttagtgaatggtggtggaatgtacaca
gcagtgcctcagaccgacccctcggagtgcatcaattgccggaactgtcggaacaataac
aggtgtttcaccaaaaccaatggcacttttagcagcaacacactacctgtggtgcccata
gtagcaccttatcagcaggacagtttagagatgaaaccgatgaatcatgtgatggttgcc
atgtgtttagcctccacggtcccagaatgcagcgtcgagctggaggaagacagcaaggag
aaagtggagcagccatctactcagcattcctgctgtcaggaaaatatgaatcagattaac
atagattacccagaaggtgacatttgtgcacgttcagaaacatcaaatcatattttgagc
tggagtcctcttattctgcagcctgtttcaaaggactgtaatgaaaaatcaggatggaat
tcacctggtgtcactttaaacagctccggggaccttcgacagctccagatgcaggaaacc
tga
DBGET
integrated database retrieval system
