Trachemys scripta elegans (red-eared slider): 117868543
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Entry
117868543 CDS
T07347
Symbol
NFRKB
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117868543 (NFRKB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117868543 (NFRKB)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
117868543 (NFRKB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
117868543
NCBI-ProteinID:
XP_034610485
LinkDB
All DBs
Position
21:6364874..6398476
Genome browser
AA seq
1308 aa
AA seq
DB search
MDSLDHMLTDPLELGPCGEGNGTRIMEDCMLGATRVSLPEDLLEDPEIFFEVVSLSTWQE
VLTDSQRDHLKKFLPHFPENNPEHQNKLIPALFSGENFRFGNPLHIAQKLFRDGHFNPEV
VKYRQLCFKSQYKRYLNSQQQYFYRLLKQILASRNHLLDLAKKGGPDLTLKKKYPSPPCG
PEERDRRTHQRYLKVLREVKEECGDTTLSSDEEDLSSWLPNSPAHCPSPALPLRVIPTLS
TLDMKTADKLDFGENDLKVMLKKHHEKRKRQPDHPDLVTGDLTLDDIMTRVNAGRKGSLA
ALFDLAIMKKKVKEKEEKKKKKLKVIKSEVEDLADSFSNADGIPPISQDPSPIALSAVKE
EPLEEIKPCLGVNEISSSFFSLLLEILLLEGPASLSVLEDKVLDWQSSPASTLNSWFSFA
SNWSELVLPALQYLTGDSRDVPSSFSPFVEFKEKTQQWKLLGSSQDHEKELVALFQLWLE
TKDQTFFKENEDSSDATTPIPRVRTDYVVRPSTGEEKRVFQEQERYRYSQPHKAFTFRMH
GFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEIC
ELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSEEEFER
IHQAQAAAAKAKKALQQKPKPPAKIKSSSKESSVKVFPSSTSEPSQLSLSDSSMPPTPVT
PVTPTTPALPATPISPPPVSVGSKTVPSVGPEPAKPNQSLLLVSSPPMPQLGTLLSTGQS
AQTQAGPQPPPTRVVSHTAASSGLPQVRVVTAQSSLPPVSQQTPVVTQQQQPASVSQIRA
TATQTKVPPQAVMTVPVKAQTSPVQVQRPGASVTGQAGIAVTALSAASSPTAKPVTSSPG
SSAPSSSSSTAVIQNVAGQNILKQVAITGQLGMKTQAGSGIPLTAANFRIQGKDVLRLPP
SSITTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFTAAAGSSTSGKGISATLHVTSN
PVQSADSPAKTSTATSASPSPAGTTVVKVTPDLKTAESTSSAFRLMPALGMTMADQKGKA
ITTVASTEAKPAATIRIVQGLGVMPPKPGQTITVATHAKQVPSSSSVSMPGTVHTSAVSL
PTMSAAVSKAVAVASGAAGTPITIGTGATAVRQVPVSTTVVSTSQAGKLPARITVPLSVI
SQPVKGKNVVTAPIIKGNLGANISGLGRNIILTTMPAGTKLIAGNKPVSFLTAQQLQQLQ
QQGQATQVRIQTVSASHLQQGTVSGSTKAVSTVVVTTAPSPKQTQDQQ
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggattctctggaccacatgctgacagacccattggagctgggaccatgtggggaggga
aatggcacacggatcatggaggactgcatgctaggagcaacaagagttagcctgccagag
gacctcctagaggatcctgagatcttttttgaagttgtcagcctatctacatggcaggag
gtgctgacagactcacagcgagaccacctaaaaaagttcctgccccatttcccggaaaac
aaccctgagcaccagaacaagctcatcccagctctgttcagcggagagaacttccgcttt
ggaaacccactgcacattgcccagaaactcttccgggatgggcacttcaatcctgaagtt
gtgaaataccgccagctctgtttcaagtcccagtacaaacgctacctgaactcccagcag
cagtacttctaccgactcctcaagcagatccttgcttcccgcaatcacctgctcgatctg
gctaagaaaggtggccctgatcttacccttaagaaaaaatacccatcccctccatgtggc
ccagaagaacgggatagacggacacatcagcgctacctgaaggtcctgagggaggtgaag
gaggaatgtggagacaccaccttatcctctgatgaagaagatctaagttcctggcttcca
aattctccagcacattgcccgagtccagctcttcccctcagagtgatccccaccttgtca
actctggatatgaaaacagcagataaacttgattttggggagaatgacctgaaggtgatg
ctgaagaagcatcatgagaaacggaaacgtcagcctgaccaccctgacctagtgacaggg
gacctgactcttgatgacatcatgacccgtgtgaatgctggccggaagggctccttggca
gccttgtttgaccttgccatcatgaagaagaaggtgaaagaaaaggaagaaaagaagaaa
aaaaagttgaaggtgattaaatccgaggtggaagatttggccgactcctttagcaacgct
gatggaatccccccaatatcacaggacccatctcccattgctctgtcagctgttaaagaa
gaacctcttgaagaaatcaagccatgtcttggagtaaatgaaatctcttccagcttcttc
tctctccttctggagatcctccttctagaaggacctgctagtctctctgtgcttgaggat
aaagttctggattggcagtcttcccctgcaagcactctgaatagctggttctcctttgcc
tctaactggtcagaactggttttacctgctctgcaatatctgacaggtgacagcagagat
gttccttccagcttttctccctttgttgaattcaaggaaaaaactcagcagtggaaattg
cttggctcttcccaagaccacgagaaggaactggtagcgctcttccagctctggttggag
accaaagaccagacgtttttcaaggaaaatgaagacagctcagacgccaccacaccgatt
ccccgggtaaggactgactacgtggtccgtcccagcactggggaggagaaacgtgttttc
caggagcaggagcgctaccgttacagccagccccacaaggccttcaccttccgcatgcat
ggctttgagtcagtggttggtcctgtgaagggagtgtttgacaaggagacctcgctgaac
aaagcccgggagcattctctactgcgatccgacaggcctgcatatgttaccatcttgtct
cttgttcgtgatgctgcggcccgccttcctaatggagagggtacacgtgctgaaatctgt
gagctgcttaaagattcccagttcctggctcccgatgtcaccagtgcccaagttaataca
gttgtgagcggtgccctggaccggctacactatgagaaagatccctgtgtgaaatacgat
atcggacgcaaactgtggatatacctgcaccgggacaggagtgaagaggagtttgaacgg
attcaccaagctcaagctgctgcagcaaaggccaagaaagccctccagcagaaaccgaaa
cctccagccaagataaagtctagtagcaaggagagttcagtgaaagtgttccccagcagc
acttcagagccaagccagctgagcctcagtgactccagcatgccaccaacccctgtgacg
ccagtgacgcccaccacaccggccttgccggcgacacccatttcacctcctccagtctct
gtgggtagcaagactgttccaagtgttggaccggagccagctaagccaaaccaaagcctt
ctcttggtgtcatctcctcccatgccccagctggggacactgctctccacaggtcagagt
gcacagacgcaggctgggccacagccgcctccaaccagggtggtaagccatactgccgcc
tcctcaggactcccgcaggtccgagtggtcactgcgcagtccagcctcccacctgtgtct
cagcaaaccccagtggtaacgcagcagcagcaacctgcatcggtgtctcagatccgtgct
acagccacacaaacaaaagtaccaccgcaggctgttatgaccgtaccagtgaaagcccaa
accagcccagtgcaggtgcaacggccaggcgcatctgtgacaggacaggcaggtatcgct
gtgacagcactctctgcggcgtccagccccactgcaaagccagtaaccagctctccaggc
agctctgcaccatcctcctcctcttccaccgctgtcatccagaacgtagctggccagaat
atccttaagcaggtggctattacagggcaacttggcatgaagacccaggctggaagtggc
atcccactcacagctgctaacttccggatccaaggcaaggacgtgctgcgcctgcctccc
tcttccatcaccacggatgccaagggacagactgtgctgcgcatcaccccagacatgatg
gccacccttgccaagtctcaagtcaccacagtcaaattgactcaggacctcttcacagca
gctgccggaagcagcactagcgggaagggcatctctgcaactctgcacgtgacatccaat
cctgtccagtctgctgattccccagccaagactagcacagccacttctgcttctcccagc
cctgctgggaccacggtggttaaagtgacacctgacttaaagactgcggagtcgaccagt
tcagctttcagactgatgcccgctctgggcatgacgatggcagaccagaagggcaaagcc
attactacagtggcatccactgaggctaagccagctgccaccataagaattgtgcaagga
ctgggggttatgccaccaaaaccagggcagactattactgtagccactcatgccaagcaa
gtgccctcttcctcttcagtgagcatgcctggcacagttcatacctcagctgtttcttta
ccaaccatgagtgctgcggtgtccaaggcagttgctgtggcctctggggcagctggcact
cccataaccataggaacaggagccactgctgtgcggcaggtacccgtgagcaccacagtc
gtatctacatcccaggcgggtaaactgccagctcgaatcacggtgccgctctcagtgatc
agccagccagtgaaaggcaagaatgtggtgacagcccccatcatcaagggcaacctcggg
gccaacattagtgggctgggtcggaatatcatcctgactaccatgccagctgggacaaaa
ctgattgctgggaacaaaccagtgagcttcctgacagcacaacagctacaacagctgcag
caacaaggccaggccacgcaggtgcgaattcaaacagtatcggcctcccatctccagcag
ggaacagtgtcgggctctaccaaggcagtctctactgttgttgtgacaacagcaccatct
ccgaaacagacacaggatcaacagtga
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