Trachemys scripta elegans (red-eared slider): 117868781
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Entry
117868781 CDS
T07347
Name
(RefSeq) zinc finger RNA-binding protein-like isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tst03041
]
117868781
Spliceosome [BR:
tst03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117868781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
DZF_N
zf-met
SH2
zf-C2H2_jaz
Kinase-like
RIO1
Motif
Other DBs
NCBI-GeneID:
117868781
NCBI-ProteinID:
XP_034610893
LinkDB
All DBs
Position
22:complement(13419676..13536304)
Genome browser
AA seq
1267 aa
AA seq
DB search
MAASNYYGFAHGAAAAGPQYSTQPATAYSHPTTAASYTVQQAPGVAHTVTPSYAPTVQAA
RPVATAAYGAYQSHSGQDYGYGTRPQEPPPQPTTTPNYQEFHIQDGYSYGRSTSASSYES
KQYYQPVATQPQHTATDSYYQSSSKGGYSQSSGIYSQSQPQRQVTTIKPVQTVSATSSSY
NAYPTVTTVQQNASASSISSYTPSSSYNSTSASYSGSNYSSYDATAYTAASTYYQPPQQP
QAQHQQPPPPPQQPKSTSSSSWSSTANSTTTNSSNSFSKKTPFQNKQLKPKGPPKQPQLH
YCDICKISCAGPQTYREHLEGQKHKKKEAAQKTGNLANCGPRGVQTQLRCELCDVSCTGA
DAYAAHIRGAKHQKVVKLHTKLGKPIPSVEPVVVNSGSGPTIAAASKPAAHAPTATSVPS
TKPTAVATNSASNISKPVPAKKPVASKITFSGTNKLQATSIKLEEVKVMQPKSELQNEQS
THDGSGDGPGGLFDVQPVGHDYVEEVRNDEGKMIRFHCKLCECSFNDPNAKDMHLKGRRH
RLQYKKKVNPDLPVEIKPSNRARKMHEEKMKKQKQKDMIKRRREEEQRWHMEMRRYEEEM
YWRRVEEEQLYWEEQRRRMAADWHPPPLMGRPGMPVPPLLPTRRPDSSDDRHIMTKHSSI
YPTEEELQAIQKVVSHSERALKLVSDSLTEQESDREEDDEERGKAETAPRILKGVMRVGI
LAKGLLLQGDRNVHLILLSAQKPTHTLLKNITEQLPKQLSTLTEDEYEVSSDAEEASILI
CSYKEPKMQVTISVTSPLMREDASADEEAAAESQPDPCDILSQQKCLESLAALRHAKWFQ
VIAAGFPRAAVDALMSQAACQQNAGCRERSASPSTTTPSPKPTSSPSARVTSSPSSRSAS
WFHGKISGVEAVQALQPPEDGLFLVRESIRHPGDYVLCVSFGKEVIHYRVIYQENQLSID
ASISFYNLIDMIEHYMKDQGAICTKLVKPKPKPGMKSAEEELAKAGWLLKLQHLTLGDKI
GEGEFGAVLQGDYMGQKVAVKNIKCDVTAQAFLAETAAMTKVRHKNLVRLLGVILHNGLY
IVMEYMSKGNLVNFLRTRGRSVLQPKQLIQFALDISQGMDYLESKKLVHRDLAARNILIS
EENVAKVSDFGLAKVDPKGVDDTKLPVKWTAPEALKNNKFSTKSDVWSYGILLWELFSYG
RAPYSKMTLKEVTEMVEKGYRMEAPEECPPSLYTLMKSCWEIEPGKRPSFKKLTEKLQKE
LKHIGDS
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagtaactattacggcttcgcgcatggtgctgccgccgccgggccccagtac
agcactcaacctgctacagcttattcccacccaaccactgcggcaagctacactgtccag
caagctcctggggtggcacatactgtgaccccatcttatgctcccacagtgcaggctgct
aggccagttgcaactgctgcctatggagcataccaatcgcattcaggacaggactatggt
tatggaactcggccgcaggaacctcccccccagcctacgacaacaccaaactaccaggaa
tttcatatacaggatggttacagttatggacggtctacatctgcaagcagctatgagagc
aaacagtactaccagccagttgctacccagcctcaacacactgccacagactcgtactac
cagtcaagctccaaaggtggctacagtcaatctagtggtatttatagtcagagccagcca
cagagacaggtgactacaattaagccagttcaaacagtgagcgccacatcttcaagctac
aatgcctacccaacagtaacaactgttcagcagaatgcatctgcctcctccatctcctcg
tacaccccctcctcttcatacaactccacttctgcatcatactctgggtcaaattactcc
agttatgatgccacagcatacacagcagctagcacttactatcagccacctcagcagccc
caggcccagcatcagcagccgccacccccgccacagcaaccgaaatctacgagctcttct
tcatggagcagcacagcgaacagcaccaccaccaactctagcaacagcttcagcaaaaaa
acaccttttcaaaacaaacagctgaaacccaaagggccccctaaacagcctcagcttcac
tactgtgatatctgcaagatcagctgtgctggtccacagacttaccgggagcacttggaa
ggacaaaagcacaaaaagaaggaggcagctcagaagacgggtaacctggcaaactgtggc
cctcgtggggtgcagactcagcttcgatgcgagctctgtgatgtctcctgtacaggagca
gatgcatatgcagcacatatccggggagcgaagcatcagaaggttgttaaattgcatact
aaattggggaagcccatcccttcagtagagcctgtagtagtgaactctggttcaggtcct
accatcgctgcagcaagtaagccagctgcccatgcccctacagctacatctgttccatca
acaaaaccaacagctgtagcaactaacagtgcaagcaacataagcaagccagtgccagcg
aagaaacctgttgcatccaagataacattttcagggactaataaacttcaggcaacaagc
atcaaattggaggaagtgaaggtgatgcaaccaaaatcagagctacaaaatgaacagtcc
acgcatgatggctctggggatggcccagggggtttatttgacgtacaacctgtgggacat
gactatgtggaagaggtacgcaatgatgaaggaaaaatgatccggtttcactgtaagctc
tgcgagtgcagtttcaatgatcctaatgccaaggatatgcacctgaaggggcgtaggcat
cggctccagtacaagaagaaagtaaacccagatctaccagttgagatcaagcccagtaac
cgagctcggaaaatgcacgaggagaagatgaaaaagcagaaacagaaggatatgataaag
agacgcagagaggaagagcagcgttggcacatggaaatgaggcgctatgaagaggaaatg
tactggcggcgggtagaggaagagcagttatactgggaagagcagcggcgtcggatggct
gcagactggcatccacccccacttatgggcagacctggcatgccagttcctcctctcttg
cctactagacgtccagactcttctgatgaccgtcacatcatgacaaaacactctagcatc
tacccaacagaagaggagctgcaggccatccagaaggtcgtctcccattctgaacgtgct
cttaagctcgtctctgattcattgacagagcaagaatctgacagagaagaagatgatgaa
gagagggggaaagcagaaactgcaccccgaattctgaaaggtgtaatgcgagttggcatt
ctggcaaaagggcttctgctccaaggagacaggaatgttcatcttatcctactctctgcc
cagaaacctacacacaccctcttaaagaacatcacagagcagctgcccaagcagctttca
acgttaactgaagatgagtatgaagtttcatccgatgctgaggaagcaagtatactcatc
tgttcgtacaaggaaccaaaaatgcaggtcaccatttcagtcacatctcctctcatgaga
gaggatgcttctgctgacgaagaagcagcagcagaatctcagcctgacccctgtgatatt
ttgagtcaacagaaatgcctagagtcattggctgcccttcgtcatgctaaatggttccag
gtgattgctgctggattccccagagcagctgtggatgcgctgatgagccaggcagcatgt
caacaaaacgctggttgccgggaacgcagtgcatcaccaagcacgaccacaccaagccca
aagcccacgagctcgccttccgcaagggtgacatcgtcaccatcgtcaagatctgcgagc
tggttccacgggaagatctccggtgtggaggccgtgcaggcgctccagccccctgaggac
gggctcttcctggtgcgggagtccatccggcaccccggggactacgtgctgtgcgtcagc
ttcggcaaggaggtcatccactaccgcgtcatctaccaggagaaccagctgagcatcgat
gcttccatctccttctacaacctcattgacatgatcgagcactatatgaaggaccagggg
gccatctgcaccaagctggtaaaacccaaaccaaagcccggcatgaagtctgctgaggag
gagctggccaaggccggctggttactgaaactgcagcacctcacactgggagacaagatt
ggggaaggagaattcggagccgtcctgcagggagattacatggggcagaaagtggccgtg
aagaacatcaagtgcgacgtcaccgcccaggcctttctcgctgagaccgctgccatgacg
aaggtccgtcacaaaaacctggtgcggctgctgggcgtgatcctgcacaacggcctctat
atcgtcatggagtacatgagcaaggggaacctggtcaacttcctgcggacacgcggcaga
tccgtcctccagcccaagcaactcatccagttcgccctggacatctcccaggggatggac
tacctggagtccaagaagctggtgcacagggaccttgctgcccgcaacatcctgatctca
gaggagaacgtggccaaagtgagtgacttcggcttggccaaggtggacccgaaaggcgta
gacgacaccaagctgccagtcaagtggacggctccggaggccctgaaaaataataaattc
tcaaccaagtcggacgtctggagctacgggatcctcctgtgggaactgttctcctatggc
cgggcgccctactccaagatgactctgaaggaagtgacggagatggtggagaaggggtac
cggatggaggcccctgaggaatgcccgccctccctctacaccctgatgaagagctgctgg
gagatagagccggggaagcggccttccttcaagaagctcactgagaagctgcagaaggag
ctgaagcacataggggacagttag
DBGET
integrated database retrieval system
