Trachemys scripta elegans (red-eared slider): 117868784
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Entry
117868784 CDS
T07347
Symbol
ARHGEF18
Name
(RefSeq) rho guanine nucleotide exchange factor 18 isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117868784 (ARHGEF18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117868784 (ARHGEF18)
Membrane trafficking [BR:
tst04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117868784 (ARHGEF18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
PH_13
SOS1_NGEF_PH
C1_2
VipD-like_C
Motif
Other DBs
NCBI-GeneID:
117868784
NCBI-ProteinID:
XP_034610908
LinkDB
All DBs
Position
22:899805..984306
Genome browser
AA seq
1574 aa
AA seq
DB search
MADSLLNHSWPSFSKRWMKRWSFKRGSDCKPCSREFAASGIPTSDCSSPDTISPSLIAED
EVFFTSMAEEKEDSSSPEPDALMGDVHSSTEDLLSIDFALHGTEYYRDLGLPNLPEAGVT
PAMAMLPEQTGQAAPSCPVPEEKPRGLGRTLVGIACPDPISGSVQSREASCHFLNSDSAC
SCGAGPQDSPPVGGCLAEQGKGLELQEDEQSFPALMRSMSTSRRHSWESPVSPTESGRRL
SLDASEIASDLEQEELERSLPCLASCVSLELPTAGEEAWGGHGSTLIKVEIEPLHLNFAI
VPDHEDTEYGSNGKRLRSKSVPSACDKVSSPRISHNLEVLLPVAKGLEPPALETIEKDHV
APDHVLIVQQVLQELKQFHGAKQRACTAEGSNESQQNLTWFEFLTNEAEDNGKSDKIERG
TKVKRRLSSLRNRVTGSWQKDKGKNKDQQKEREKSQKWKRVNGHQLAPGTFSSFTSCSLC
AKPLVNKHGLQCLNCAVNVHKNCKTLLAECSSTRPKQKDLQHRPPGSPQSSPQCFYPAAS
LKEQPRSALLGSDGTPVLSRHLGMTITQRGNSPSALNTAVSVNKFGPITGEMDEGDSGFI
KFKQTSDDVVSLAPSTAESIFLEDVYFSSLRSEIETDAHEFEAESWSLTVEQSYAKEQKR
AVMKRQDVIYELMQTEMHHVRTLKIMLKVYSKALREELQFTNTVINKIFPCVDELLELHG
QFLFQLKERRKASLEEGSDRNYIIQNIGDLLVQQFSGESGERMKEKYSMFCCGHNEAVSH
YKDLLQSSKKFQNLIKKIGNSSIVRRLGVQECILLVTQRITKYPVLVERIIQNTEAGTKD
YEDLSQALSLIKDMITHVDAKVNECEKRQRLREIMYKMELKSSGKFKNGLLFRKNDMGQR
QLLLDGMLFWKAASGRLKDILAVLLTDVLLLLQEKDQKYTFASVDSKPPVISLQKLIVRE
VANEEKAMFLISASLKGPEMYEIHTSSKEERNSWMAHIRRAVESCPDEEEGTFSEPEEER
RLAEARVAKIKEFQDRLSMKDDLILQSLNEKQQIYLEMSEMNGFEDLSQGARSKLLFRGE
TSENLQGEVILKSAVTEIENLQNLIFTHLANGTGRSEDSCGLGLPRRAETFGGYDSTTTV
PNKNGSFKKKVCGNDQRLRDRRGPAISSDVQLQDLPLDAEEGPPTSDVMRLDYNSSFQPL
LESELVQRIQRLSQLLLSLQAVISQQDSYIEIQRATIIDREKQYRLQSTRGNLLLEQEKQ
RNFEKQREELANVQKLQNQLKVEQQRWERERDRQQREFESIEARLQEREEETRQLKDRLN
QEREELERQREAYQHDLERLREAQRAVEKERERVEQLKKLKKQNTVLGAFSPEMGQSQML
NHSVSFNGEGLEGSVPHLKPSGRASVLGMDYVERPELVRRDSAILENRPVLAMKNEVPIH
LLSATNQIQKPAAVQQQIPTKLATFTKGSKEKGGKSKASHRTDSSASVDLKQLLTPKLVG
KDEGALKNRRSASPGLPNSQSIAFQPEIYSPADSQPEAVNPSKSNSVHVHTLVASPPALI
NAEDDTCKEDVIFF
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atggcagactcgctgctaaaccactcctggccgtcgttctcaaagcgctggatgaagaga
tggtcgtttaagcgagggtcagactgcaagccatgctcgcgggagttcgctgccagcggc
atccccacgtcagactgcagcagcccagacaccatctccccatccctgattgctgaagat
gaagtcttcttcaccagcatggcagaggaaaaggaagactcgtcgtctccggagccggat
gcgctgatgggtgatgtgcacagcagcactgaggatctcctctccatagacttcgctctc
cacggcacagagtattacagagacctggggctgccgaacctgccagaggccggcgtgact
ccagcaatggccatgctgccagaacagacaggccaggcggcgcccagctgtcctgtaccg
gaagagaagcctagaggcttggggcgaacgcttgtgggcattgcctgccccgatcccatc
tccggctcagtgcagtccagggaggccagctgccatttcctgaacagtgactctgcttgc
tcctgtggggcagggccccaggacagcccccctgtgggggggtgcctggcagagcagggt
aaaggactggagttgcaggaggatgagcagtccttccccgcgctaatgagatccatgtcc
acctcacggaggcacagctgggaaagccccgtgtcccctacagagagcgggcgcaggcta
agcctggatgcctccgagatcgccagtgacctggagcaagaagagctcgaaaggagcctg
ccctgcctggcttcctgtgtgtccctggagctgcccacggctggggaggaggcctgggga
ggccatggcagcactctgataaaagttgagatagagcccctgcatctgaacttcgccatc
gtgcccgatcacgaggacacagaatatggcagcaatgggaagagactgaggtcaaagtct
gttccttccgcctgtgacaaggtttcctctcctcgaatctctcacaacctggaggtgttg
ctcccagttgccaaaggtcttgaaccgcctgcgctggagacgattgaaaaggaccatgtg
gccccagaccatgtgctgatcgtccagcaggtgctgcaggagctgaaacagtttcatggg
gcgaagcaaagggcctgcacagccgagggcagcaatgaatcccagcagaacctcacctgg
tttgagttcctgactaatgaggctgaggacaatgggaagagtgacaagattgagagaggc
accaaggtgaagcgccggctgagttccctgcggaaccgcgtcaccggctcctggcagaag
gataagggtaagaacaaagaccaacaaaaagagagagaaaagagccaaaagtggaaaagg
gtcaatgggcaccagctggcgccagggactttctccagcttcaccagctgttcactgtgc
gccaaacctctggtgaataaacatggtctgcagtgcctgaactgtgcagtgaatgtccac
aagaactgcaagaccttactggctgaatgcagcagtaccagacccaagcagaaggatttg
caacacagacctcctggatccccacaaagttcaccccagtgcttttacccagcagcctct
ctgaaggagcagccccgaagtgcccttctgggatcggatggcaccccagttctgtctcgg
catctcggcatgactatcacccaaagaggaaattcgccgtctgcattgaatactgctgtt
tctgttaataaatttggaccaatcacaggagaaatggatgaaggggattcgggatttata
aaatttaagcagacatcagatgatgttgtctcacttgcaccttcaacagcagaatccatt
tttctggaagatgtatacttttcctctctgagaagtgagatagaaacagatgctcatgag
tttgaggcagaatcttggagtctcacagtggaacagtcttatgcaaaggagcaaaagaga
gcagttatgaaaaggcaagatgtcatttatgagctcatgcagactgaaatgcatcatgtc
cgaacactgaaaatcatgctgaaggtgtactccaaagcactgagagaggagctgcagttc
acgaacactgtcatcaacaaaatctttccttgtgtggatgaattgttggagttgcatggg
caattcctgtttcaattaaaggagcgacggaaggcgtccttggaggaaggcagtgaccgg
aattacattatccagaacattggcgacctcttggtacaacagttttcaggcgaaagtgga
gagagaatgaaagaaaaatacagtatgttctgttgtggtcacaatgaagccgtcagtcac
tataaggacctgctgcagagcagcaagaagttccaaaacttaataaagaaaataggtaac
tcttctattgtgaggagacttggtgtccaggaatgcatcctcctagtcactcaacgcatt
acgaagtacccagtgctggtggagcgtattattcagaatacagaagctggcactaaggat
tatgaagatctgtcccaggcactcagtttaattaaggacatgatcactcatgtagatgcc
aaggtaaatgagtgtgagaagaggcagcgtcttagagagattatgtacaaaatggagctg
aaatcatcagggaaattcaagaatgggctgctcttccggaagaatgacatggggcagcgg
cagctcctgctggatgggatgctgttctggaaagccgcatcagggaggctcaaagatatt
ctggctgtcctgttaactgatgtacttttgctgttgcaagaaaaggaccaaaaatatact
tttgcatctgtggactctaagccaccagttatttcattgcaaaagctaattgtaagagag
gtagctaacgaggagaaagcaatgttcttaattagtgcctcattaaaaggaccagagatg
tatgaaattcacaccagctccaaagaagagagaaattcttggatggcgcacattcgcaga
gctgtggaaagctgccctgatgaagaggaaggaacattcagtgagcccgaagaagaaagg
agactggctgaagcacgagttgctaaaataaaagaatttcaagaccgtctgagcatgaaa
gatgatctgattttgcaaagtctaaatgagaaacaacagatttatctagaaatgtctgaa
atgaatgggtttgaagatctttcccaaggagcccgatccaaactcctcttcaggggggag
acctcagagaatctgcaaggagaggtgatcctgaaatctgcagtgacagaaattgagaat
ctccagaacctgatcttcacacacttagccaacgggaccggtcgttctgaagacagctgt
gggttggggctacccaggagagcggagacctttgggggatatgacagcaccaccacagtg
ccaaacaaaaatggtagttttaagaagaaggtctgtggtaatgaccagaggctgagggac
cggagaggccctgcaataagttcagatgtgcagctccaagaccttcctcttgatgcagaa
gaaggacctcccacaagtgatgtaatgagactggattacaacagcagttttcagcccctc
ctggaatctgagcttgtccaacggatacagaggctgtcccagttgctcctcagccttcag
gcagtgatatcacagcaggacagctacattgaaatccagcgagccaccatcatagatcgg
gagaagcagtatcggctgcagtccacgcgtgggaacctgctgctagagcaggaaaagcag
cgcaactttgagaagcagagagaagaactggccaatgtacagaagcttcagaaccagctg
aaggtggaacagcagcgttgggaacgggagagggaccggcagcagagggagtttgaaagt
atagaggcacggttgcaggagcgagaagaggagactcggcagctgaaggatcgcttgaac
caggagagggaggagctggagagacaacgagaggcctatcagcatgacctggagaggcta
cgggaagcgcagagagcagttgagaaggagagagagcgtgtggagcagctaaagaagctg
aaaaaacagaatacggtgttgggcgcgttctccccagaaatgggacagagtcaaatgctg
aaccattcagtcagtttcaatggagaagggctagaagggtctgtgccacacttgaagccc
tctgggagggctagtgtcttgggaatggattatgtggagcggccagagctggttcgcagg
gacagtgccatattggagaatcgtccggttcttgcaatgaagaacgaagtgccaatccac
ctgctgagtgcaaccaaccagatacagaaaccggctgcagttcagcagcaaatccccacc
aagcttgccaccttcacaaaaggaagcaaagaaaagggggggaaaagcaaagcatcgcac
aggacagacagctcagcatctgttgacctgaaacaactgcttacacctaaacttgttggg
aaagatgagggtgcactgaagaacagacggtcagcgagcccgggcctcccgaacagccag
agcattgcgttccagccagagatttacagcccagctgacagccagcccgaagcagtcaat
ccatccaagtccaacagtgttcacgtccacaccttggtggcctctccgccagccctgata
aatgctgaagacgatacctgcaaggaagatgtcatttttttctaa
DBGET
integrated database retrieval system
