Trachemys scripta elegans (red-eared slider): 117868822
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Entry
117868822 CDS
T07347
Symbol
TICAM1
Name
(RefSeq) TIR domain-containing adapter molecule 1
KO
K05842
toll-like receptor adapter molecule 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04217
Necroptosis
tst04620
Toll-like receptor signaling pathway
tst04621
NOD-like receptor signaling pathway
tst05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117868822 (TICAM1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117868822 (TICAM1)
04621 NOD-like receptor signaling pathway
117868822 (TICAM1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117868822 (TICAM1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TRIF-NTD
RHIM
TIR_2
Motif
Other DBs
NCBI-GeneID:
117868822
NCBI-ProteinID:
XP_034611013
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All DBs
Position
22:7825994..7831769
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AA seq
703 aa
AA seq
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MAEAGEVQPGFEGVFSILSRIPEERLVSLKHKLKHTRPCTNSCKLLQAMVLLTLGRESEA
RICLDALGDDEGALCIWRSKWGTAGSENPLTPQQEAGALLALARIYSLLVEENLCTHLAR
DNAYKAAIVAFRASEDPRRDNLSSILAEAQEKCTIDFSSTETGNEFKTLRSDPGHFPTAS
PAPVMRSPPVQIGSRSVLSGPQTLRSSGSPASFISHFEISQSPTMEFHTCSAHRNHVPQP
SKLCGGAANCTVQPGGGRVSHGPRDAGRFSSSSAPPLQSQVRSHPSENPQAGSFVPPSLP
VPETPLPHPSAVHCPVECTDPPTMGTAELQERVVQKPEQESLTELPSVCTPGPASGSIRM
PVEDSCVLTEKAETASFSSSGDLPPPQAAAAPTPELDCGEKRFFSFVVLHASEDVAIACR
VKEMLESMGVPDGATFCEEFFIPGQCQLTCFQDAIDNSAFTLLLLTQNFQSHFYMHQMNT
ALMDSLQRLPKYNSVIPFLPKENPSKCPIPTVLAGLVPLDENSPVFSKTVKNTFRLKRIS
EQKAMWSQLQHIQEQHRKQQQYQEHLQMLQQNLVGLNLGSQPGYPSQMPLPGLLPYPAGI
QQLLQQLVSSLQLQTSSLPMFAPPAMYQPHPASQFMPTQSAPSPSQHFILPPSHQNTMQG
SGGPQPLIIQNAQMVQIGDHNQMQVERTRVVAESSDEETSESH
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggctggcgaggtccagccaggctttgagggggtcttcagcattttatctagg
atcccagaagagagactcgttagcctcaaacataagctgaagcacacaagaccctgcacg
aacagctgtaagctgttgcaagccatggtcctgctgactttgggacgagagtcagaggca
aggatatgtctggacgctttgggtgatgatgaaggagccctctgtatctggaggagcaaa
tggggtaccgcaggcagcgagaacccactgactccccagcaagaggcaggtgccctcctg
gccctggcacggatctactcgctgctggtagaggaaaatctgtgcactcacctggccagg
gacaatgcctacaaggctgccattgtggccttcagagccagcgaggatcctcggagagac
aatctgagcagcatcttggccgaggctcaggaaaagtgcacgattgacttcagctccaca
gagacgggtaacgaatttaagacactgagatctgaccctgggcatttcccgactgccagc
ccggctccagtgatgaggagccccccagtgcagatcgggagcagatcggttctctcaggg
ccacagactttgcgttcctctggcagcccagcctccttcatcagccactttgagatcagc
cagtcccccacgatggagtttcacacctgctcagctcaccgtaaccatgtcccgcagccc
agcaagctttgtgggggcgccgcgaactgcaccgtgcagcctggcggagggagagtcagc
cacggcccacgggacgccggccggttcagcagctcctctgcaccccctctgcaaagccaa
gtaagaagccacccatctgagaatccccaggccggtagctttgttcccccatctcttcca
gttcccgaaaccccacttccgcatccgagtgcggtgcactgtcctgtggaatgcactgac
cctcccaccatggggacagcagaactgcaggaacgtgtggtccaaaagccagaacaggag
tcacttaccgagctccctagcgtgtgtaccccagggccagcctctggttccatccgaatg
ccagtagaagattcctgtgtcctaacagagaaagcagagacggcatccttctcctcttca
ggggacctccctcctcctcaggcagcagccgcccccacaccagagctggactgtggtgag
aaaaggttcttcagtttcgttgtcctgcacgccagcgaagatgtggccattgcctgccgg
gtgaaggagatgctggagagcatgggggtgcccgacggtgccacattctgcgaggagttc
ttcatccctgggcaatgccagctgacttgcttccaggatgccatagacaactctgccttc
accctcctgctactgacccagaacttccagtcccacttctacatgcaccagatgaacacg
gccctgatggattccctccagcggctgcccaagtacaattcggtcatccctttcttgccc
aaggagaacccctcaaagtgtccgatccccaccgtgctggcggggttggtgcctctggat
gagaactccccggtgttctccaagacggtgaagaacaccttccgcctcaagagaatcagt
gagcagaaggcgatgtggagccagttacagcacatccaggagcagcacaggaaacagcag
caataccaggaacacctccagatgctgcaacagaacttagttggtctgaacttggggtcc
cagcctggctacccatcccaaatgcctttgccaggactgttgccgtatcctgcaggaatt
cagcaacttctgcagcagcttgtgtctagtctccaactccagacatcttctcttccaatg
tttgcccctcctgccatgtaccagcctcacccagctagtcagttcatgcccacccagtca
gctccctccccttcccagcacttcatcctcccgcccagccaccaaaacacgatgcagggg
tcaggaggcccccagcccctcatcattcagaatgctcaaatggtgcagattggagaccac
aatcagatgcaggtggagaggaccagggtggtggctgagagctccgatgaagagaccagc
gagagtcactga
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