Trachemys scripta elegans (red-eared slider): 117868824
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Entry
117868824 CDS
T07347
Symbol
HDGFL2
Name
(RefSeq) hepatoma-derived growth factor-related protein 2
KO
K25065
hepatoma-derived growth factor-related protein 2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tst03400
]
117868824 (HDGFL2)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117868824 (HDGFL2)
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Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Med26
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
117868824
NCBI-ProteinID:
XP_034611016
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Position
22:complement(8307025..8327152)
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AA seq
651 aa
AA seq
DB search
MPHSFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP
YDKYKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPPPASSSDSEVPENDPVAGSDGGEEE
DESAAVAVAAVAAAAMEKLDSDEESDKGSDHSGLKRKALAMKMPVAKRPRKSSSDLDQGS
ASPSEEENSESSSESEKNSDQDFTPEKKSVTRAPRRVPAGGRKKKKVDSGSDSDSKVDSE
EENETVDVTKSDSDSDSDSDVSVKKVPRGRKPAEKPPPKPRGRKPKPERAPTSSSSDSDS
DSDVDRISEWKRRDEERRRELEEKRKREQEEEIRKLREQEKEEKEKKKEKAEKGEEAHSD
SDSSMDDEVAKKGKKIRGKDQLSSDSDLELEKEVKKPLKKQQPSELSRKPNLKEKRGRSE
EKPRNKPLRVERGRRKSDAIPERRMEKKKEPTIEEKLQKLHSEIKFALKVDNPDIKRCLN
ALEELGTLQVTSHILQKHTDVVATLKKIRRYKANKDVMEKAAEVYTRLKSRVLGPKIEVN
QKANKTGMEKDKGDMEKGQEKLSGGEAPNEKEEEETNADLSAPVNGESMSQKGESVEEKE
RDQAQGSGDGEREASPEDTHDAQDYPEIKRPSTDRERVRLESDSVDEEEDS
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacagcttcaagcccggagacctggtcttcgccaagatgaaggggtacccgcac
tggccggcccggattgatgacatagcagacggcgccgtgaaacccccgccgaacaagtac
cccatcttcttctttgggacgcacgagacagccttcttgggacctaaagacctgttccct
tacgacaagtacaaggacaaatacgggaagccaaacaagcgaaaaggcttcaatgaggga
ttgtgggaaatccagaacaacccccatgccagttacagtgcccctccgccagcgagctcc
tcagacagcgaggttcccgagaacgacccggtggcaggaagtgatggaggagaggaggaa
gacgaatcggcggctgtggcagtcgctgctgttgctgcagccgccatggagaagctagac
agcgacgaggagtccgacaaggggagtgaccacagtgggctgaaacgaaaagcgctagct
atgaaaatgccagtggctaaacgaccccggaaatcctccagcgacctcgaccagggcagt
gcgtctccctcggaagaggagaactcggaaagttcttctgagtcagagaaaaatagtgac
caggactttactccagagaagaagtcagtgaccagagctcccaggagggtgcctgcaggc
ggaaggaagaaaaagaaggtggattcggggtccgactcggactccaaggtggattcggag
gaggaaaacgagacagtggacgtgactaagtcggactctgactcggactccgactcggac
gtgtctgtgaagaaggttccgcggggcaggaagccagctgagaagccgcccccaaaacct
cgcggcaggaaaccaaagcctgagagagctccgactagctccagcagcgacagtgacagc
gacagcgacgtggatcgcatcagcgaatggaagaggcgtgacgaggagcgccgccgggag
ctggaggagaagaggaagagggagcaggaggaagagatccgcaagctacgggagcaggag
aaggaggagaaggaaaagaagaaggagaaggcggagaagggggaggaggcgcactcagac
agtgacagcagcatggatgacgaggtggccaagaaaggcaagaagatccgaggcaaggac
cagttgtcatcggactctgacttggagctggagaaagaggtaaagaagccgctgaagaag
cagcagccctcagagttgtcaaggaaaccgaatctaaaggagaagaggggccgatcggag
gagaaacctcgcaacaaacccttaagagtggaacgaggccggagaaagtctgacgcgatc
ccagagaggaggatggagaagaagaaggagcccacaattgaagagaagcttcagaaactt
cacagcgagatcaagtttgccctgaaagttgataatccggatatcaagaggtgcctgaat
gccctggaagagctgggaaccctgcaggtcacctctcacatcctccagaaacacactgat
gtggtggctacactgaaaaagatccgtcgctacaaagctaacaaggacgtgatggagaag
gctgccgaggtttacacccgcctgaagtcgcgtgtcctggggccgaagatcgaggtgaac
cagaaagccaacaaaactgggatggagaaagacaagggggacatggagaagggccaggag
aagctgtcgggaggggaggccccgaacgagaaagaggaggaggagacgaatgccgatctg
tcagcccccgtaaacggcgaatccatgtcccagaaaggggagagcgtggaggagaaggag
cgagaccaagcccagggatctggcgacggagaacgagaggcgtccccggaagacacacac
gatgcgcaagactatcccgagatcaaaaggcccagtacggacagggagcgggtccgcctg
gagtcggactccgtggacgaggaggaggacagctga
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