Trachemys scripta elegans (red-eared slider): 117868834
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Entry
117868834 CDS
T07347
Symbol
SIN3B
Name
(RefSeq) paired amphipathic helix protein Sin3b isoform X1
KO
K23213
paired amphipathic helix protein Sin3b
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117868834 (SIN3B)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
117868834 (SIN3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
117868834
NCBI-ProteinID:
XP_034611036
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Position
22:485387..515447
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AA seq
1137 aa
AA seq
DB search
MAAGGGGGGRGGSGPRWGGGRAGGGAAQEKLPVHVEDALSYLDQVKIRFGSDPATYNGFL
EIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPLGYRIEIPKNGKLSIQSPLAS
QVSSEPVPSAHPGGGLLLHYCQENSHNHSDCSEDFRQQLPYKDDKSQISLESDSVEFNNA
ISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTKGRPFRGMSEEEVFTEVANLFRGQE
DLLSEFGQFLPEAKRSLFTGNGPCEMNSVQKTDPEKNLEHSKKRSRPLLLRPVPSPAKKK
MKLRGTKDLSVATVGKYGTLQEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELL
QLVTPFLGKFPELFAQFKSFLGVKELSFASPLSDRSGDGMSREIDYASCKRIGSSYRALP
KTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVV
LETNLATIRVLESVQKKLSRMSQEDQEKFRLDDCLGGTSEVIQRRAIYRIYGDKAPEIIE
SLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKVWREQYEKAYLKSLDHQAVNFKQNDTK
ALRSKSLLNEIESVYDEHQEQHSEGRGATTNEPHLIFIYEDKQILEDAASLISYYGKRQP
TIQKEDQATIRQIVHHFVPQLFFSPLPDHSISEESTDEDRENHQGQNLDNPELRKKHVPG
PPSSPLEEKAGFCDAAAAEPHKTLDDVYSLFFANNNWYFFLRLHQTLCSRLLKIYRQAQK
QLLEYRTEKEREKLLCEGRKEKSNDPAMELRLKQPSEVELEEYYPAFLDMVRSLLDGNID
PTQYEDTLREMFTIHAYIGFTMDKLVQNIVRQLHHLVSDDICLKVVELYLSERKRGAAGG
NLSSRCVRAAKETSYQWKAERCMADENCFKVMFLQRKGQVIMTIELLDTEETQTEDPMEV
QHLANYMEQYVGVEGVPNNQNDGFLLKPVFLQRNLKKFRKWQCKQVRALRSEVKSSWKRL
IGVESACNMDCRFRLNTHKMMFIMNSEDYMYRRGTLSRAKQVQPMVLLKHHQQFEEWHSR
WLEENVTVEAAELVQDWLMGDEDEDMVPCKTTCETVNVHGVPVNRYRVQYSRRPASP
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggggggaggcggaggcggccgggggggcagtggccccagatggggcgggggc
cgggctggcgggggcgcagcgcaggagaaacttccggtgcatgtggaggatgcactctcc
tacctggaccaggtgaagattcgctttggcagtgatcccgccacctataacgggttcctg
gagatcatgaaggaattcaagagccagagcattgatactcctggtgtaatcaggcgggtt
tctcagctgtttcatgaacatcccgacctcattgtcggattcaatgctttcctccctttg
ggctacagaatagagattccaaagaacgggaagttaagtatacagtcgccactggctagt
caggtgtcttcagagcctgttccaagtgctcacccgggtggtgggttattgttacattat
tgccaggagaattcccacaaccacagtgactgctctgaagacttccggcagcaacttcca
tacaaagatgataaatctcaaatctccttggaatctgattctgtagagttcaataatgca
ataagttacgtgaataagatcaaaacacgttttcttgaccatcctgaaatctacagatca
ttcttagaaattcttcacacttaccagaaagaacagctgaacactaaaggccgacccttt
cgaggcatgtcggaggaagaagtgtttactgaagtagcaaatctcttcaggggacaggag
gatctactctctgagtttggacagtttctccctgaggctaaaagatctttgttcacagga
aatgggccatgtgaaatgaacagtgtccagaaaactgatccagaaaaaaatctggaacat
agtaaaaagcgatccagacctctactgctgcgtcctgttcccagcccagcaaagaagaaa
atgaaactgcgaggtaccaaagatctgtcagttgcgacagtgggaaaatatggaacgttg
caggagttttctttcttcgataaggtgcgcagggtactgaagagtcaggaagtgtatgag
aacttcctccgctgtatagcactcttcaatcaggagctagtgtcaggctcagagcttctc
cagctagtcaccccatttttagggaaattcccagaactctttgcacagttcaaatccttc
cttggagtgaaagagctttcatttgcttctccgctgagtgatcgatctggggatggaatg
agtcgggaaattgattatgcttcctgcaaacgcataggatccagttaccgggctcttcca
aaaacctatcagcagccaaaatgcagcggaagaacggccatttgcaaggaggtgttaaat
gacacctgggtctcgtttccatcctggtctgaagactctacgtttgtcagctcaaagaag
actccctatgaggagcagctgcatcgctgtgaggacgaacgatttgagttggatgttgtc
ttggaaaccaatctggccacaatacgcgtgttggagagtgttcagaaaaagctgtctcgg
atgtctcaagaggaccaggagaaatttcgattggatgattgcttgggaggaacgtcggaa
gtgatccagcgcagagccatctaccgtatctacggtgataaagcaccagaaatcattgaa
agtcttaagaaaaatccggttactgctgttcccgtagttttaaaaaggttgaaagcaaaa
gaggaggaatggcgggaagcccagcagggcttcaacaaggtctggcgggagcagtatgag
aaggcgtacttaaagtcccttgaccaccaggctgtcaacttcaaacaaaatgacaccaaa
gccctgcgctccaagagcttgctgaatgagattgagagcgtctacgatgagcaccaggag
cagcattcagaggggagaggtgccaccacgaatgagcctcacctcatcttcatctatgag
gataaacagattctagaagatgcggcttcgctcattagctactatgggaaacgacagccc
actatccagaaggaagatcaggccaccattcggcaaatagtgcatcactttgtaccgcag
ctgtttttctctccgctcccggaccacagtatttctgaagagtcgactgatgaggacaga
gaaaaccatcagggacagaacctggataatcctgagctacgaaagaaacatgtgcctggg
cctccaagcagccctctggaggagaaagctggcttctgtgacgccgctgctgctgagcct
cacaaaactctggacgacgtttatagtctgttctttgccaataataattggtatttcttc
ctccgccttcaccagactctctgctccaggctcttaaagatttatcgtcaggctcagaag
cagcttctagagtatcggactgaaaaggagagggagaaactcctctgtgagggaaggaaa
gaaaagtccaatgatccagccatggaactgagattgaaacaaccaagtgaggtggagttg
gaggaatactacccagcattcttggatatggtgagaagcttgctggatgggaacattgac
cccacgcagtacgaggacactctgagggagatgttcactatccacgcctacatcggcttc
accatggacaagctggtgcagaatattgtccgccagcttcaccatcttgtgagtgatgat
atctgcctgaaggttgtagagctctacttaagtgaaagaaagcgaggtgctgctggaggc
aacctatcctccaggtgtgtccgggcagccaaggagaccagctatcagtggaaggctgag
cgctgcatggcagatgagaactgcttcaaggtaatgtttcttcagaggaaagggcaggtg
atcatgaccatcgagctactagacacagaagaaacccaaacagaagaccctatggaggtt
cagcacttggctaactacatggaacagtacgttggggtggagggcgtcccaaacaaccag
aacgatggcttcttactgaaaccggtctttctgcaaaggaaccttaaaaaattccgcaag
tggcaatgcaagcaagtgagagctctacggagtgaagtgaagagttcctggaagaggctg
atcggggtggagagtgcatgcaacatggactgcaggttcaggctcaacacccacaaaatg
atgttcatcatgaactctgaggattacatgtacaggcgtggtactctctcccgagccaag
caggtgcagcccatggttctgctcaagcaccaccagcagtttgaagagtggcacagcagg
tggctagaagagaatgttacagtggaggcagcagaactggttcaagactggctcatgggc
gatgaggacgaggacatggtcccgtgcaaaacaacttgtgagacggtgaatgtccatggg
gtccccgtgaacagatacagagtccagtacagtcgccgtccagcctcaccatga
DBGET
integrated database retrieval system
