KEGG   Trachemys scripta elegans (red-eared slider): 117868839
Entry
117868839         CDS       T07347                                 
Symbol
ELL
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
tst  Trachemys scripta elegans (red-eared slider)
Pathway
tst03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tst00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117868839 (ELL)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tst01009]
    117868839 (ELL)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tst03021]
    117868839 (ELL)
Protein phosphatases and associated proteins [BR:tst01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117868839 (ELL)
Transcription machinery [BR:tst03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     117868839 (ELL)
    Little elongation complex (LEC)
     117868839 (ELL)
SSDB
Motif
Pfam: ELL Occludin_ELL RNA12
Other DBs
NCBI-GeneID: 117868839
NCBI-ProteinID: XP_034611047
LinkDB
Position
22:complement(1696432..1775644)
AA seq 607 aa
MAALQAERGYGLSCGRLGRGTRVSVFHVKLTDSAVRAFEGYQGSKDSVALRPTIQFQGNQ
GHITIPRPDCQTEVRTFMFYLSNIGRDSPQGSFDCIQQYVSSNGNIHLDCLGSIQDKITV
CATDDSYQKARQSMAQAEEETRSRSAIVIKPGGRYVGKKVQFRKPAPGASDAVPARKRPT
PVNLASAIKRGNSAISQRPFKDRVVHLLALKPYKKPELILRLQKDGLSQQDKDLLDSLLQ
QVANLSAKDSTYTLKDCMYKDVQKDWPGYSEGDQQLLKRILVRKLSQPQNVSSFVGDTPS
LSPPKENVNSSSPPQKRSQPLEFIDPLANKKPRISHLAHRTQPTFNGKLNSSNGKDAPAP
AVQSAVADSVSSGSHLPVLELPRPHDPLSDVSSDLSHNGRDCENPEATDRLTNTLSTDCP
QTSKHNCSSLYVKTKKKSKKHKEKERKEKSEEKCKEEKQDCELIKKGGLKTNTSKGVAGL
NGTCNNSSVPTSTSEMPDYLLKYASISSLEQRQSYKNDFNAEYNEYRDLHARIERITRRF
TQLDSQLKQLSQGSEEYKTIHDQILQEYRKIKKTNPNYSQEKNRCEYLHNKLAHIKKLIA
EYDQQQF
NT seq 1824 nt   +upstreamnt  +downstreamnt
atggcggcgctgcaggcggagcgcgggtacgggctgtcctgcgggcggctcggccggggc
acccgcgtctccgtcttccacgtcaagctgacggacagcgcggtgcgggccttcgagggc
taccagggcagcaaggactctgttgcattgagaccaacaatccaatttcaaggaaaccaa
gggcacatcactattcccaggcccgattgccaaacggaagtgcgaactttcatgttttat
ctttcaaatattggcagggacagcccccaggggagttttgactgtatacagcagtatgta
tccagcaatggtaatatccatctggattgtcttggaagcatacaggataaaatcacggtg
tgtgctactgatgattcctaccagaaggcaaggcagagcatggcacaagctgaggaggaa
acgcgcagccgaagtgcaatagttattaaacccggcgggagatatgtaggtaaaaaggtt
cagtttcgtaagcctgcaccaggagcttccgatgctgttcccgctaggaaacggccaaca
ccagtcaacctcgctagtgcaataaagagaggcaatagtgcgatttctcagagacccttc
aaagatagagttgtgcacttattggcactaaagccttataagaaacctgaacttattctc
agattgcaaaaggatggactttctcagcaggacaaggatttgctggacagcctcttgcaa
caggtggcaaatctgagtgccaaggacagcacttatacattgaaagattgtatgtacaaa
gatgtacagaaagattggcctggctactcggaaggagatcagcagttactgaagaggata
cttgttcggaaactctctcagccccagaatgttagcagttttgtgggagacactccttcc
ttgagtcccccaaaagaaaacgtgaactcctcttcccctcctcagaaacgatcccagcct
ctggaattcattgatccactagccaacaaaaagcctaggatatctcacttggcccataga
actcagcccacttttaatgggaaactgaactcctcgaacgggaaagatgcacctgctcct
gccgtgcagtcggctgtggccgattctgtcagctccggctctcacttaccagttctggag
cttccaaggcctcatgaccccctttctgatgtcagcagtgacctaagtcacaatggcaga
gactgtgagaacccagaggcaactgacagattgactaatactttgtcaacagactgtccc
caaacgagcaaacacaactgtagctcactgtatgtgaaaacaaagaaaaaatccaaaaag
cacaaagaaaaagagagaaaagagaaaagtgaagaaaaatgcaaagaggagaagcaggac
tgtgaactaatcaagaaaggtggcttaaaaacgaatacctccaagggtgtcgcaggttta
aatggaacgtgcaataattctagtgtaccaacatcaacttcggaaatgccagattattta
ttaaaatatgcatccatttcctctttggagcagcgtcagagttataagaatgacttcaat
gcggagtacaatgagtacagagacttgcacgcccggatagagagaataactcgacggttc
acccagttagattcccagctgaagcagctttcgcaaggctctgaagaatataagacgatc
catgatcaaattttacaggaatatcgtaaaatcaaaaagacaaaccctaattacagccaa
gaaaaaaatcgctgcgaatacctccacaacaaactggctcatataaaaaaactgatagca
gagtatgaccaacagcagttttag

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