KEGG   Trachemys scripta elegans (red-eared slider): 117868866
Entry
117868866         CDS       T07347                                 
Symbol
NWD1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1
  KO
K24734  NACHT domain- and WD repeat-containing protein
Organism
tst  Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:tst00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:tst04990]
    117868866 (NWD1)
Domain-containing proteins not elsewhere classified [BR:tst04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   117868866 (NWD1)
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40 WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 DUF4062 NACHT Beta-prop_WDR19_1st NBCH_WD40 AAA_16 Beta-prop_NWD2_C NPHP3_N Beta-prop_HPS5 ANAPC4_WD40 ATPase_2 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_SCAP AAA_22 Prot_ATP_ID_OB_C AAA Beta-prop_WDR75_1st AAA_5 nSTAND1 RNA_helicase ResIII AAA_28 Beta-prop_Vps41 APAF1_C Bac_DnaA NB-ARC NPHP3 RuvB_N KAP_NTPase AAA_25 ORC-CDC6-like
Other DBs
NCBI-GeneID: 117868866
NCBI-ProteinID: XP_034611111
LinkDB
Position
22:455937..479465
AA seq 1620 aa
MSLSCLSPDTCRDLLQGKMVPLPFQPSSLVRIFISSASSDMATERETLLKAAYPEVQAFC
QKHSLMFEVIDLRWGVCDVIDTDHMSTQLCLEEIESCQKLSVGPTFIGLLGDRYGHRPLP
RLIEEKEFEALIAQLIGDPTATHLLTFWYWKDENAIPSVYVLQPITDHLPHCHPTANQAQ
HQGDVEVWRSLEKDLAVALRLAAREAEKHGLISQEQRHRYDKSETEWEIEQGLLNTQEID
LAASIFLREVEGLDKHLLEGTSMQLVDTEEDGSLDNEAQQLLRSLKAKIANYYPQHLKVH
TVPWNAHPENPRHKGHTKYLKELCEQFITATNHQVLRSLRYRGKSSEEPEGLLQELSHHM
MLCLESCRVFCGRQALLDNILQSIRQNDDHVHTPLILYGPPGCGKTALMCKLSEQVRTLL
GQETVVVIRQLGTSQVSSAIHSLLRDICSQVCLAFGLPPLPVQVTQACSDLILFFHNLLL
TVSHLGVQSLVLFFDSVDQLIPANGAHRLYWVPKDCPPKVHIVVSNSTAEHGILETLQEA
MPEPTAYFEVGPLSREEGGKMLEVLLASVKRKLSPAQQTVLQNSFPEGGHPLLFKLAFNE
ARRWASYTQPSALMIVTTVQEAMHRLCARLEKLHGMVLVAHMLGYIASSRNGLSDAELKD
ILSLDDEVLAEIYQHCSPPCKTILRFPPLLWARLRCDIGECLAERQADGFALLGLAHRQF
TEVVQNRYLPAQDKTKRHLLLADFFRGTWSWGMKKSLKLPLLGKSLNADRKVAPQPLWFS
DTVANRRKLSELPFHLLNAGRIEELKQDVLGNMNWITCKIVATGIQGIANDFAMCNERIN
CPELRLIQETLLLLKPALDYIDGVVVSIIYTEMLARLYFFMVSYPGLIGRLCQQCLSWLN
VCPHPVLVPLCGFLQPPGGPLKMTITGFLKGVTVLELSSDHRVLVAGSQDGTMVVWIMED
IEVMHTLTGHSAEVRCVKVFGKGTSAVSAAMDYTLRIWNLVSGRQKFSIQDSHSGEQHLY
QLHVDERNRIVYSASGAKVNAWHLETGEHIFQISGEASDAWLCTEVFEPRQVVMTMSEGG
TLSLWDSSTGELQSKRQLSGLQEEAPTCSILIQKQGKMIVGFSRGSLSMIFSDGNSLMKK
LPGRVRFLVVSEDESLLAAGFGVYVRVFLANSKGFHRFMAADLEHECVVHSAVFSPDNSI
IVTGSQGESIQVWSLSEQGLLTDTLDGMGTPVTLLALCGHTLVSASHSAPYLKVWDLTYD
RKHKNLAPVPDRTGCTAMSHDGNYVYFPQAGERHQVIIWDSTKGAECDTLDTSAQVRCLE
VAEQRKLLFTGLVSGTVLVFPLNSRQDVVCIPPPKSQKPINHMALNRQEEQLAIAYDDLV
LVLDVSPGKPCPVIDKPIYTFYTQIPAAVISSVAVLANYRVLYGMSSGDLFLYDCPHSKV
FPLEMHKCIVTCLETSHGEQWALSGSEDSLQCLWDLELCQWEHEMCYYKQTSFLKGIQCA
CFSKDDKYVYTGSFDHSITVWDVSSGALLAVQFVYATANRIMPTADGFVATTRLGYIIRE
RFRCPQSISSQYNPLQNIKATCVVKSRKKEKANPREQHDRGKVSRNQIRTNKLSQNCVTV
NT seq 4863 nt   +upstreamnt  +downstreamnt
atgagtctcagctgcctcagcccggacacatgccgggaccttctccagggtaagatggtc
cctttgcccttccagccgtccagtctggtccgaatcttcatcagctcagcttcctcagac
atggctacagagagagagaccctgcttaaggcagcataccctgaggtccaggccttctgt
cagaagcacagtttaatgtttgaggtaattgacctgagatggggtgtttgtgacgttata
gacactgatcacatgagcacacaactctgtctggaggagattgaatcctgtcaaaaactg
tcagtgggtcccacttttatcgggctgcttggggatcgctatggacaccggcccctcccc
cgacttatcgaagagaaagagtttgaggccctgattgcacagctgataggggaccccacc
gccacacatcttctgacattttggtactggaaggatgagaatgccattccttctgtgtat
gtcctgcagccaattactgaccatctgccccactgccaccccactgccaaccaggctcag
caccagggagatgtggaggtctggaggagcctggagaaagatctggccgtagcactgcgc
ctggcagcccgggaagcagagaagcacggactcatcagccaggaacagaggcatcgctat
gacaaatcagagacagagtgggagattgaacaaggcctcctcaacacccaagagatcgac
ttggctgcttccatattcctcagagaggttgagggccttgacaaacacctgctggaaggg
acaagcatgcaactggtggatacagaggaagatggtagcctggacaatgaagcccaacag
ctgctccggagcctcaaggcaaaaattgcaaactattacccccagcatctcaaagtgcat
acagtcccatggaatgcacaccctgagaacccgcgacacaaagggcataccaagtacctg
aaggagctgtgtgaacagttcataactgctacaaatcaccaggtcctgagaagcctccga
taccgagggaagagcagcgaggagccagaggggcttttgcaggagctgagccaccacatg
atgctgtgcctggagagctgcagagtgttctgtgggaggcaggccttactggataatatt
ctgcaaagcatcagacagaatgatgaccatgtccacacacccctcattctctatgggcct
ccaggctgtggaaagacagctctgatgtgcaaattgtctgagcaggtgcgaactcttcta
gggcaggaaactgtggtggtaattcgccagctggggacatcccaggtcagctctgcaatc
cacagcctgctgagagatatttgttcccaggtgtgtttagcatttggtttgccacctctt
cctgtacaggtaacacaggcttgcagtgatttaatcctgttcttccataacctcctcctc
actgtctctcaccttggtgtacagtcactggtgctgttctttgactctgtggaccagcta
atccctgctaatggtgcccacagactctactgggtgcctaaagactgccccccaaaggtt
cacattgttgtctccaattccacagcagagcatgggattctggaaactctccaagaggcc
atgcctgagcctacggcctactttgaagtgggtccattatccagagaggaaggtgggaag
atgttggaggtgctgttggcatcagtgaaacggaagctgagcccagctcagcagactgtt
ctccagaacagtttccctgagggtgggcacccgctgctattcaagctggccttcaatgag
gccaggagatgggcatcctacactcagccttcagcactgatgattgttaccacagtccaa
gaggccatgcaccgtctgtgcgcgagactggaaaagctgcacggcatggtcctggtggca
cacatgctggggtatattgcctcctcacggaatgggctatcagacgcagagctgaaggac
atcttgtccctcgatgatgaggttctcgctgagatttaccagcactgctctcctccatgt
aaaaccatcctccgctttcctcctctgctgtgggcacgactgcgctgtgacattggagag
tgcttggcagagaggcaggcagacggctttgcgcttcttggccttgctcacagacagttt
actgaagtggtgcagaatcgttatctaccagcccaagacaaaaccaagcgtcacttgctc
ctagcagatttcttcagggggacttggagttggggcatgaagaagtccctgaaactgcca
cttcttggcaaatctctgaatgctgacaggaaggtagcacctcagccactctggttctct
gataccgttgcaaatcggaggaagctaagcgaactgccttttcacttactgaatgctggg
agaattgaggagctaaagcaagatgtgctggggaatatgaactggatcacctgtaaaatt
gttgccactggaattcagggcattgccaatgactttgccatgtgcaatgagcgtattaac
tgcccagagctacgccttatacaagaaactcttctccttttgaaaccagcacttgactat
atagatggtgttgtagtgagtattatatacactgagatgctggccaggctgtattttttc
atggtttcctatcctggtctaattggaaggctgtgccagcagtgtctgagctggctcaat
gtctgtccccatcctgttcttgtcccgctgtgtggatttctccagcctcctggtgggcct
cttaagatgactatcactggatttctaaaaggtgtgacagtgctggagctcagttctgat
cacagggtgctggtggcaggatcccaggatggcacaatggttgtgtggatcatggaggat
attgaggtgatgcacaccttgactgggcactctgctgaggtgagatgtgtgaaagtgttt
ggaaaagggacttccgctgtctcagctgccatggattacactctacgcatctggaattta
gtctctggcagacagaagttttccattcaggacagtcactctggagagcagcatctatat
cagcttcatgtggatgaaaggaacaggattgtatattcagcatcaggtgcaaaggttaat
gcctggcacctggaaacaggggaacatattttccagatttctggtgaggcctcagatgcg
tggctatgcactgaagtgtttgaaccaaggcaggtggttatgactatgtctgaaggagga
acactgagtctgtgggacagcagcacgggagagctccagtctaagcgccagctatcaggg
ctacaggaagaagcaccaacttgcagcattctgatccagaagcaaggaaagatgatagta
ggatttagcaggggttccctctccatgatcttctctgatggaaacagcttaatgaagaaa
cttcctggaagggttcgctttctggtagtgtcagaagatgagtcccttcttgctgcaggc
tttggggtgtatgtgcgagtgttcctggccaactcaaagggattccacaggttcatggca
gcagacctggaacatgagtgtgtggtgcactcagctgttttctctcctgacaacagcatc
attgtcacaggctctcagggtgaatctatccaggtgtggagtttatcagagcagggtttg
ctgacagacactttggatggcatgggaacaccagtgactcttttagccctttgtggccac
acattggtatctgcctcccatagtgcaccatatctcaaagtttgggacctcacttatgat
cgtaagcacaaaaacttagcaccagtcccagatcgcacagggtgcactgcaatgtcccat
gatgggaactatgtctacttccctcaagccggagagagacatcaagtcatcatctgggac
tccactaaaggtgcagagtgtgacacactggacacctctgcccaagtgagatgtctagag
gtggctgagcagaggaagctccttttcactgggctggtgtctggaacggtccttgtgttt
ccacttaattccaggcaggatgtggtgtgcatcccacccccaaagtcacagaaaccaatc
aaccacatggcactcaacaggcaggaagagcagctagccatagcatatgacgacttagtt
cttgtgctggatgttagccctggaaagccatgccctgtgattgacaaacccatttatacc
ttttatactcagatccctgctgctgtgatttccagtgtggctgtccttgcaaactaccga
gtcctctatggcatgtcaagtggggacttgttcctttacgactgcccacattccaaagtg
tttcctttggaaatgcacaaatgcatagtcacctgtttagaaaccagccatggagagcag
tgggcactaagtggctctgaagattctctgcagtgtctctgggacttggagctctgccag
tgggaacatgaaatgtgctactataagcagacttccttcttgaaaggtattcagtgtgct
tgcttctcaaaagatgataagtacgtgtacactgggtcattcgatcactccattacagtt
tgggatgtttcaagtggtgccctgttggctgttcaatttgtgtatgcaactgctaacaga
atcatgccaactgcagatgggttcgttgcaacaacaagactcggctacataattcgtgag
aggttccgctgcccacaatccataagctcgcagtacaatccactccagaacatcaaggca
acatgtgtagtaaaatccagaaagaaagagaaggcaaacccaagagaacaacatgacaga
ggaaaagtctccagaaaccagattcgaaccaataaactctctcaaaactgtgtgactgtg
taa

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