Trachemys scripta elegans (red-eared slider): 117868881
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Entry
117868881 CDS
T07347
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117868881
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tst03310
]
117868881
Transcription factors [BR:
tst03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117868881
Nuclear receptors [BR:
tst03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
117868881
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117868881
NCBI-ProteinID:
XP_034611138
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All DBs
Position
22:complement(11164975..11204954)
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AA seq
465 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQNQEQNGVSKDDSEALARV
YPTSVSSGVSDLDDISPLSDGLLFDFPLTPDGGSTYYNLDLLTSAQPSPDQSSMDISDAK
LIKQESIYELMLEPGLFAHGTLEGSQLASDISMLEIDRIAQNVVKSHLETCQYTTEELKR
LAWMLYTQEEIRSLQNKSCETMWQQCSLQISNAIQYVVEFAKRIDGFMELCQNDQIILLK
AGCLEVLLIRMIRAFNPLNNTVLFEGKYGGMQMFKSLGCDDLINAVFELGRNLCRLQLSD
EEIALFTAAVLLSPDRPWLTESKKVQKLQDKIYIALQHEIQKKHPSEDKLSKMISKLPLM
KTICNLHLDKLEFFRLLHPETVMNFPPLYKEVFNSELQYSDPRES
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcccaaatcgaagtgatcccgtgtaagatctgcggagacaagtcttcggggatt
cactatggtgtcatcacctgtgaaggctgtaagggtttcttccggagaagccagcagaat
aacgccagctactcctgctcgcgccagaggaactgcctgatcgaccggaccaaccggaat
cggtgccagcactgccgcctgcaaaaatgtctggcgctgggcatgtcgcgtgacgcggtg
aagttcggccgcatgtccaagaagcagcgggacagcctgtatgcggaggtgcagaagcac
caacagaaccaggagcagaacggggtctccaaagacgactccgaggccctggcacgggtc
tatcccaccagcgtgagcagcggggtctcggacctggacgatatctccccactgtcggac
gggctcctcttcgacttccccctcacccctgacggaggcagcacctactacaacctcgac
ctcctgacctcggcccagccctcgcccgaccagtccagcatggacatcagcgatgccaaa
ctcatcaagcaggagtccatctacgagctgatgctggagcccggcctctttgcccacggc
accctggagggcagccagctcgcctcagacatttcgatgctcgagatcgaccggatcgct
cagaacgtggtcaagtcccacctggaaacctgccagtacacgacggaggagctcaagagg
ctagcatggatgctctacacccaggaggagatcaggagcttgcagaacaagagctgcgag
accatgtggcagcagtgctccctgcagatctccaacgccattcagtacgtggtggagttc
gccaagcgcatcgacggcttcatggagctctgccagaacgaccagatcatcctcctcaaa
gcaggttgcctggaagtgcttctgatccgaatgattcgggcattcaaccctttaaataac
acggtgctcttcgaggggaaatacggtggcatgcagatgttcaagtcgcttggctgcgac
gaccttatcaatgccgtcttcgagctcgggaggaacttgtgccggctacagctctcggac
gaggagattgcactgttcactgcagccgtcctgctctctccagatcgcccttggctcacg
gaatccaagaaggtgcagaaactccaggacaagatctacatagccctgcagcacgagatc
cagaagaaacaccccagcgaggataagctctcgaagatgatttccaagctgcccttgatg
aaaaccatctgcaacctgcacttggacaagttggagtttttccggctcctgcatccggag
accgttatgaactttccgcccctgtacaaggaagtattcaactcggagctccagtacagc
gacccgcgagagagctaa
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