Trachemys scripta elegans (red-eared slider): 117868936
Help
Entry
117868936 CDS
T07347
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03018
RNA degradation
tst03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117868936 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
117868936 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117868936 (LSM7)
03041 Spliceosome [BR:
tst03041
]
117868936 (LSM7)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117868936 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
117868936 (LSM7)
Spliceosome [BR:
tst03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
117868936 (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
117868936
NCBI-ProteinID:
XP_034611226
LinkDB
All DBs
Position
22:complement(15430781..15441231)
Genome browser
AA seq
103 aa
AA seq
DB search
MADKEKKKKESILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQEG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagaaaagaagaagaaagagagcattttggatctctcaaaatacattgac
aaaacaattcgagtaaaattccaaggtggtagggaagctagcggagtcttgaaaggattt
gaccctcttctaaaccttgtgcttgatggcactattgaatatatgagagatccagatgac
caatacaaactaacagaggatacccgtcagctgggactggtggtttgcagaggaacatcc
gtggttcttatttgtccacaggatggaatggaagctattccaaaccctttcattcagcag
caggagggctaa
DBGET
integrated database retrieval system
