Trachemys scripta elegans (red-eared slider): 117868945
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Entry
117868945 CDS
T07347
Symbol
ABCA7
Name
(RefSeq) phospholipid-transporting ATPase ABCA7 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst02010
ABC transporters
tst04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117868945 (ABCA7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117868945 (ABCA7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tst02000
]
117868945 (ABCA7)
Transporters [BR:
tst02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117868945 (ABCA7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
MukB
Motif
Other DBs
NCBI-GeneID:
117868945
NCBI-ProteinID:
XP_034611241
LinkDB
All DBs
Position
22:5130298..5176671
Genome browser
AA seq
2274 aa
AA seq
DB search
MGFGTQLGLLLWKNFTYQRRQKIQLAVELLWPLFLFFILISVRQSHPPFEQHECHFPNKA
LPSAGTLSWIQGIICNVNNPCFQYPTAGETPGVVGNFNQSIISRLFADARKVLLHANSKQ
TLSSFGQLLPALRRLWGSGAPWMARPVKDYLKEGETFSHFLRINASLPPALVEELLGARL
DLRILSLAATGVPLKDIVCNASVLAEFLVAAEASSTERLQERLCALPAPTLQAMERSFFS
QADFSQVLAERLSSESDDVASALETLVTFLQGAETLAKEVGAMTSFAEFRRELQVLSGRD
AGSSLQGAFEAVSRIACGHPEGGGLKIPSLNWYEDNDIKAFLNRNSSEQGAIPLDNATSP
YCKELIQNLESNPLSRILWRGIKPLFIGKILYTPSNPSTRRIMAEVNRTFQELAVLREVR
GTWQELGPRVYAFLNSSLEMRVLQSLLRAPATSRLVEQRLNHTSWDPSAVGEFLAGVPGG
EAYTWRQVYAEVDQVVGTLSQFIECVSLDKVEAVASEEQLVSRALQLLEGRQFWAGVVFL
PPDNATPGELPPHVRYKIRMDIDDVTRSNKIKDRFWDPGPAADPFSDLRYVWGGFVYVQD
LVERAVTRVLSGTASRTGIYLQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVAMIIKG
VVHEKEARLKETMKIMGLSSGILWLSWFISSFIPFLISASFLVLILKLGDILPYSDPAVV
FLFLAAFAVATIAQCFLISTFFSRANLASACGGIIYFSFYLPYVLCVAWRDHITFPLRLC
VSLLSPVAFGFGCEYFSLYEEQGVGIQWYNLNASPVQDDPYNFATSLALLLLDACLYGLA
TWYIEAVFPGQYGIPKPWNFPFLKSYWFGESSSDGCHPFPTNSLSSAEVLVEQPPAHLRS
GVSIRNLVKIYRSSSKVAVNGLNLRFYEGQITSFLGHNGAGKTTTMSILSGLLPPSSGTA
YILGRDIRSEMDSIRKTMGMCPQHNVLFDILTVEEHIWFYGRLKGLSGEQVKEEVKQIIQ
DVGLPHKRREQTKNLSGGMQRKLSVAIAFVGGSQVVILDEPTAGVDPYSRRGIWELLLKY
RKGRTIILSTHYMDEADLLGDRVAIISQGRLCCCGSPLFLKTRLGTGYYLTLVKREAGAQ
ERAAPGGSASCVTIASRKDDSGSERSCDTGLGSEQCSESSTVDVPQLSALIQKLVPGSRL
VEDIGHEVLYVLPYGGAKDGAFGELFRELDGRLGELGVSSYGISDTTLEEIFLKVAEDTG
VDADTTGSGGAPQRGRTAAPASSYTLRTVSENGDVEAADTEPLKGSRKAEEPKETDFLHS
LDGRGSQQVLGWALTRQQLRALFTKRLLYARRSTRGFFAQIVLPAVFVCIALLFSLIVPP
FGKYPPLHLEPWMYGQQFTFFSDDSPGDPDSARLLGALLAEPGFGTKCMRDAPEGRAPCP
PASHERGFWTPEVPRSLAELFQNTNWTPANPSPACECSSRGARKMLPDCPEAAGGLPPPQ
VQRGTGDILQNLTGRNISDYLVKTYPKIIRQGLRTKKWVNEQRYGGISLGARSSQALPSA
EEVDGAVREIRAVLNITKGSPIDRLLGNLSSFIEGLDTRNNIKVWFNNKGWHAMVSFVNV
VNNGLLRASLPPGAEPWRYGITAINHPLNLTKEQLSEAALMATSVDVLVSICVMFAMSFV
PASFVLFLIEERVSKAKHLQFVSGMKPGVYWLGNFAWDMCNYLVPAGLVVLIFLCFQQKS
YVSSANLPSLVLLLFLYGWSITPLMYPASFLFSIPSTAYVVLTCVNLFIGINGSVATFVL
ELFTDQKLNHVNRILKKVFLIFPHFCLGRGLIDMVKNQAMADAFERFGDKRFLSPLCWDL
VGKNMFAMALQGVVFFLFTILLQYRFFVKLRPFAVKLPPLGGEDEDVAREREKITSGARQ
GDILVLHDLTKVYRARKKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDTEVTLG
DACLKGHSVLSDLQSVHQNMGYCPQFDAINDLLTGREHLEFYCHLRGVPEEETPRVAQWG
VSTLGLVQYADRPAGGYSGGNKRKLSTAIALLGAPPVVFLDEPTTGMDPRARRFLWNCIL
SVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTITLRVSGP
SPDLRPVETFIQDSFPGIVLKERHHCMLQYQLPSRSCSLAKIFSILSAHRGTYRIEDYSV
SQTTLDQVFVHFAKDQSDDEPLPDLAPPSEPEPPGPWKRITHFLEDDSYQESAV
NT seq
6825 nt
NT seq
+upstream
nt +downstream
nt
atggggtttgggacccagctggggctgctgctgtggaagaacttcacctatcagcgcagg
cagaagatccaactcgccgttgagctcctgtggcccctcttcctcttcttcatcttgatc
tcggtgcgacagtcacatccccctttcgagcagcatgaatgtcacttccccaacaaggcc
ttgccctcggctgggacgctgtcgtggattcagggcatcatctgtaacgtgaacaatccc
tgcttccagtacccgacggctggcgagacgcccggcgtggtggggaacttcaaccagtcc
atcatctcccgcctgtttgcggatgcccggaaggtgctgctccatgccaacagcaagcag
accctgagcagctttggccagctcctgcctgccctgcgccggctctgggggagcggagct
ccgtggatggccaggccggtcaaggactacctgaaagagggtgagaccttttcccacttc
ctccggatcaacgcctccctcccccctgccctggtggaggagctgctgggagctcggttg
gacctgcgcatcctctcccttgccgccaccggtgtgccgctgaaggacatcgtctgcaac
gcctccgtgctggcggagttcctggtggcagcggaggcgagctccacggagcgcctgcag
gagcggctctgtgctctgccagcgcccaccctccaggccatggagcgcagtttcttctcg
caagcggatttctcccaagtcttggcggaacggctgagctccgaatcggacgacgtggcg
agcgccctggagaccctggtcactttcctccagggcgccgagacgctagcgaaggaggtt
ggcgccatgaccagctttgcagagttccggcgggagctgcaggtgctgtcggggcgggac
gccggctcctccctgcagggcgccttcgaggccgtgtcccgcatcgcctgcgggcacccg
gaagggggcggcctcaagatcccctccctcaactggtacgaggacaacgacatcaaggcc
tttctgaaccgcaacagctcagagcagggagccatcccgctggacaacgccaccagcccc
tactgcaaggagctgatccagaacctggagtcgaacccgctgtcccggatcctgtggcgg
gggatcaaacctctcttcatcggaaaaatcctctacaccccgtccaaccccagcacacga
aggatcatggccgaggtgaaccggacgtttcaggagctggccgtgctgcgggaggtgcgg
ggcacctggcaggagctggggcctcgggtctacgccttccttaacagcagcctggagatg
cgggtccttcagagcctgctgcgggcacctgccacctcccgcctggtggagcagcgcctg
aaccacacctcgtgggacccgtcggccgtgggcgagttcctggcgggggtgccagggggt
gaggcctacacctggcgccaggtctacgcggaggtggaccaggttgtgggcaccctgtcg
cagttcattgagtgtgtctccctggacaaggtggaagcggtggcctctgaagagcagctg
gtgtcgcgggccctgcagctgctggaggggcgccagttctgggccggcgtggtcttcctg
ccccccgacaatgccacccccggggagctgcccccccacgtccgctacaagatccgcatg
gacattgacgatgtcacccgcagcaacaagatcaaggacaggttctgggacccgggcccg
gccgccgaccccttcagcgacctgcgctacgtctgggggggcttcgtctacgtgcaggac
ctggtggagcgggccgtcacgcgggtcctgagtggcacggccagccgcaccggcatctac
ctgcagcagatgccctacccctgctacgtggatgacgttttcctgcgggtcttgaaccgc
tcactgccgctgttcatgacgctggcctggatctactcggtggccatgatcatcaaaggg
gtggtgcatgagaaggaagcccggctgaaggagaccatgaagattatggggctcagcagc
ggcattctctggctcagctggttcatcagcagtttcatccccttcctcatcagcgcctcc
ttcctcgtcctcatcctcaagctgggagacatcctgccctatagtgatcccgctgtggtc
ttcctcttcttggccgcctttgctgtggccaccatcgcccagtgcttcctcatcagcacc
ttcttctcccgcgccaacctggcctcggcctgtggcggcatcatctacttctccttctac
ctgccctatgtgctgtgcgtggcctggcgcgaccacatcaccttcccgctgcgcctctgt
gtgagcctcctgtccccagtggcgtttgggtttggctgtgagtacttctccctgtatgag
gagcagggcgtggggatccagtggtacaacctgaacgccagccccgtgcaggacgaccct
tacaacttcgccacctccctggcgctgctgctcctggacgcgtgtctgtacggcctggcc
acgtggtacatcgaggctgtcttcccaggccagtacgggattcccaagccctggaatttt
cccttcctgaagagctactggttcggagagtcgtcctccgatggctgccaccccttcccc
accaactccttgagctctgcggaagtgctggtggagcagccgcccgcgcacctgcgctca
ggggtctccatccgcaacctggtgaagatttaccgcagtagcagcaaagtggccgtcaac
gggctgaacctccgcttttacgagggccagatcacctccttcctgggccacaacggggcc
ggcaagaccaccacgatgtccatcctgagcggtctgctgccccccagttccgggacggcc
tacatcctgggccgggacatccgctccgagatggacagcatccggaaaaccatggggatg
tgtccccagcacaacgtcctctttgacatcctgacggtggaagagcacatctggttttat
gggcgcctgaaggggctgtcaggggagcaggtgaaggaggaggtgaagcagatcatccag
gacgtggggctgccccacaagcgtcgggagcagaccaaaaacctgtcgggtgggatgcag
cggaagctctccgtggccatcgccttcgtgggaggttcccaggtggtcattctggacgag
cccaccgcgggggtcgacccctattcccgccggggcatctgggagctgctgctgaagtat
cgcaaaggccgcacgatcatcctctccacccactacatggatgaggcagacctgctgggc
gaccgcgtggccatcatctcccagggccggctctgctgctgcggctccccgctcttcctc
aagaccaggctgggcaccggctattacctgaccctggtgaagcgggaggccggcgcccaa
gagcgggcagccccggggggcagcgccagctgcgtcaccatcgccagcagaaaggacgac
agcggttcggagcgcagctgtgacaccggcctgggcagcgagcagtgcagcgagtccagc
accgtggacgtgccgcagctgtcggccctgatccagaagctggtgcctggctcccggctg
gtggaggatattggccacgaggtactgtacgtcttgccgtacggcggcgccaaggatggg
gccttcggggagctcttccgggagctggacggccgcctgggcgagctgggggtctccagc
tacgggatctcggacaccaccttggaagagatctttctgaaggtggctgaggacacagga
gtggacgcggacaccacaggctctgggggagccccccagcgagggagaacggcagcgccg
gcctcctcctacaccctccggacggtgagcgagaacggggacgtagaggcagcagacacc
gagccgctcaaaggatccaggaaagctgaggagccaaaggagaccgatttcctgcacagc
ctggatggcaggggctcccagcaggtgctgggctgggccctgacccgccagcagctccgg
gcccttttcaccaagagactcctctacgcccggcgcagcaccaggggcttcttcgcacaa
atcgtcctgccggccgtctttgtgtgcatcgccctccttttcagcctgatcgtgccgccc
ttcgggaagtaccccccgctgcacctggagccctggatgtatggccagcagttcaccttt
ttcagtgatgactccccgggggaccctgactctgcgcggctcctgggagccctgctggct
gagccgggcttcggtaccaagtgcatgagggatgccccggaggggagagcgccttgccca
ccggcgtcccacgaacgaggcttctggacccccgaagtgccccggtccctggccgagctc
ttccagaacacgaactggacgccagccaacccctccccggcctgtgagtgcagctcccgg
ggggcacggaagatgctgcccgactgccctgaagcagcggggggacttcctcctccacag
gtgcaaaggggcaccggcgacatcctccaaaacctcacgggcaggaacatctccgattac
ctggtgaaaacctaccccaagatcatccgccaggggttgagaaccaagaaatgggtcaac
gagcagaggtacggtggcatctcgctgggcgcccgtagctctcaggccctgccctcagca
gaggaggtggatggtgctgtgcgggagatccgggccgtgctgaacatcaccaaggggagc
cccatagacaggcttctgggaaacctgagcagcttcatcgaaggcctggacacccgcaat
aacatcaaggtctggttcaacaacaagggttggcacgccatggtgtccttcgtcaacgtg
gtgaacaacgggctgctgcgggccagcctgcccccgggcgcagagccctggcgctacggc
atcacagccatcaaccaccccctgaacctcaccaaggagcagctctcggaggctgcgctg
atggccacctcggtggacgtgctggtctccatctgcgtgatgttcgccatgtccttcgtc
cccgccagcttcgtcctcttcctcatcgaggagcgggtcagcaaggccaaacacctgcag
ttcgtcagcggcatgaagcccggcgtctactggctgggcaacttcgcctgggacatgtgt
aactacctggtcccagcagggctggttgtcctcatcttcctctgcttccagcagaagtcc
tacgtgtcctcagccaacctgccctccctggtgctgctgctgttcctctatggctggtcc
atcacgccgctgatgtacccggcctccttcctcttcagcatccccagcacggcctacgtg
gtgctgacctgcgtcaacctcttcatcggcatcaacggcagcgtggccaccttcgtgttg
gagctcttcaccgaccagaagctgaaccacgtcaaccgcatcctgaagaaggttttcctc
atcttcccgcacttctgcctgggccggggcctcattgacatggtgaagaaccaggccatg
gccgacgctttcgagcggttcggagacaagcgtttcttgtctccgctgtgctgggacctg
gtcgggaagaacatgttcgccatggctctccagggcgtcgtcttcttcctcttcaccatc
ctgctgcagtaccggttcttcgtcaagctacgaccctttgccgttaaacttccccctctg
ggcggggaggacgaggacgtggccagggagcgggagaagatcaccagcggagcacggcag
ggagacatcctggtgctgcatgacctgaccaaggtgtaccgggcgaggaagaagccggct
gtggaccgcctgtgtgtgggaatccccccaggggagtgtttcggtctcctgggggtgaac
ggcgctgggaagacgtccaccttcaaaatgctgacgggggacaccgaggtgaccctagga
gatgcctgtctgaaagggcacagcgtgctcagcgacttgcagtcggtccatcagaacatg
ggctactgcccccagtttgacgccatcaacgacctgctgacgggacgggagcacctggag
ttctactgccacctgcgcggtgtccccgaggaggagacgcccagggtggctcagtggggg
gtctccacgctgggcctggtgcagtacgccgacagacccgccgggggatacagcggggga
aacaaacgcaagctctccacggccatcgccctcctcggtgccccgccggtcgtcttcctg
gacgagccgaccacggggatggacccgcgagccaggcggttcctgtggaactgtatcctc
agcgtgatcaaagagggcaggtccgtggtgctcacctcccacagcatggaggagtgcgaa
gccctgtgcacccgcatggccatcatggtgaacggccggttccgctgcctgggcagtgtg
cagcacctgaagaacaggttcggcgacggctacacgatcacgttgcgggtgtcgggcccc
agcccggacctgcggcccgtggagacgttcatccaggactccttccccggcatcgtcctc
aaagagagacaccactgcatgctgcaataccagcttccctctcggagctgctccctggcc
aagatcttcagcatcttgtccgctcacaggggcacctaccgcattgaggactactccgtg
tcccaaaccacactggaccaggtgtttgttcacttcgccaaggaccaaagcgacgacgag
cccctgccggacttggcgcccccgtctgagcccgagccccctggcccctggaagaggatc
acccacttcctggaggacgacagctaccaggagagtgccgtctga
DBGET
integrated database retrieval system
